RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	KRTAP4-9	Q9BYQ8	210 aa		4.87	□□□□□ -1.63
HDAC7-222	ENST00000477937	LCE4A	Q5TA78	99 aa		4.77	□□□□□ -1.65
HDAC7-222	ENST00000477937	KRTAP4-3	Q9BYR4	195 aa		4.77	□□□□□ -1.65
HDAC7-222	ENST00000477937	MIR22HG	Q0VDD5	57 aa		4.76	□□□□□ -1.65
HDAC7-222	ENST00000477937	LCE1D	Q5T752	114 aa		4.76	□□□□□ -1.65
HDAC7-222	ENST00000477937	KRTAP12-3	P60328	96 aa		4.75	□□□□□ -1.65
HDAC7-222	ENST00000477937		K7ERS5	55 aa		4.71	□□□□□ -1.66
HDAC7-222	ENST00000477937	MT4	P47944	62 aa		4.71	□□□□□ -1.66
HDAC7-222	ENST00000477937	KRTAP25-1	Q3LHN0	102 aa		4.7	□□□□□ -1.66
HDAC7-222	ENST00000477937		V9GYY9	64 aa		4.69	□□□□□ -1.66
HDAC7-222	ENST00000477937	PSPHP1	O15172	72 aa		4.66	□□□□□ -1.66
HDAC7-222	ENST00000477937	KRTAP5-4	Q6L8H1	288 aa		4.66	□□□□□ -1.66
HDAC7-222	ENST00000477937	KRTAP4-7	Q9BYR0	210 aa		4.65	□□□□□ -1.67
HDAC7-222	ENST00000477937		Q1T7F1	81 aa		4.64	□□□□□ -1.67
HDAC7-222	ENST00000477937	KRTAP4-6	Q9BYQ5	205 aa		4.57	□□□□□ -1.68
HDAC7-222	ENST00000477937	HMCN1	Q96RW7	5635 aa		4.55	□□□□□ -1.68
HDAC7-222	ENST00000477937	KRTAP23-1	A1A580	65 aa		4.52	□□□□□ -1.69
HDAC7-222	ENST00000477937		A6NED7	52 aa		4.52	□□□□□ -1.69
HDAC7-222	ENST00000477937	KRTAP19-4	Q3LI73	84 aa		4.52	□□□□□ -1.69
HDAC7-222	ENST00000477937	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.47	□□□□□ -1.69
HDAC7-222	ENST00000477937	AHNAK2	Q8IVF2	5795 aa		4.47	□□□□□ -1.69
HDAC7-222	ENST00000477937	KRTAP15-1	Q3LI76	137 aa		4.45	□□□□□ -1.7
HDAC7-222	ENST00000477937	CDC42SE1	Q9NRR8	79 aa		4.43	□□□□□ -1.7
HDAC7-222	ENST00000477937	LOC100996750	A0A140TA64	210 aa		4.42	□□□□□ -1.7
HDAC7-222	ENST00000477937	KRTAP5-10	Q6L8G5	202 aa		4.42	□□□□□ -1.7
HDAC7-222	ENST00000477937	KRTAP12-4	P60329	112 aa		4.4	□□□□□ -1.71
HDAC7-222	ENST00000477937	KRTAP20-2	Q3LI61	65 aa		4.4	□□□□□ -1.71
HDAC7-222	ENST00000477937	SPRR5	A0A1B0GTR4	108 aa		4.39	□□□□□ -1.71
HDAC7-222	ENST00000477937	RPS28	P62857	69 aa	Known RBP	4.38	□□□□□ -1.71
HDAC7-222	ENST00000477937	LCE3C	Q5T5A8	94 aa		4.38	□□□□□ -1.71
HDAC7-222	ENST00000477937	ROMO1	P60602	79 aa		4.35	□□□□□ -1.71
HDAC7-222	ENST00000477937	KRTAP5-3	Q6L8H2	238 aa		4.33	□□□□□ -1.72
HDAC7-222	ENST00000477937	PCP4	P48539	62 aa		4.26	□□□□□ -1.73
HDAC7-222	ENST00000477937	KRTAP5-7	Q6L8G8	165 aa		4.25	□□□□□ -1.73
HDAC7-222	ENST00000477937	SYNE1	Q8NF91	8797 aa	Known RBP	4.22	□□□□□ -1.73
HDAC7-222	ENST00000477937	MT1A	P04731	61 aa		4.18	□□□□□ -1.74
HDAC7-222	ENST00000477937	KRTAP6-1	Q3LI64	71 aa		4.14	□□□□□ -1.75
HDAC7-222	ENST00000477937	KRTAP9-6	A8MVA2	160 aa		4.11	□□□□□ -1.75
HDAC7-222	ENST00000477937	KRTAP5-2	Q701N4	177 aa		4.08	□□□□□ -1.76
HDAC7-222	ENST00000477937	KRTAP9-4	Q9BYQ2	154 aa		4.05	□□□□□ -1.76
HDAC7-222	ENST00000477937	KRTAP4-11	Q9BYQ6	195 aa		4.03	□□□□□ -1.76
HDAC7-222	ENST00000477937	KRTAP6-2	Q3LI66	62 aa		3.97	□□□□□ -1.77
HDAC7-222	ENST00000477937	KRTAP5-8	O75690	187 aa		3.89	□□□□□ -1.79
HDAC7-222	ENST00000477937	MT3	P25713	68 aa		3.84	□□□□□ -1.79
HDAC7-222	ENST00000477937	OBSCN	Q5VST9	7968 aa		3.83	□□□□□ -1.8
HDAC7-222	ENST00000477937	BRK1	Q8WUW1	75 aa		3.82	□□□□□ -1.8
HDAC7-222	ENST00000477937	AHNAK	Q09666	5890 aa	Known RBP	3.78	□□□□□ -1.8
HDAC7-222	ENST00000477937	MUC5AC	P98088	5654 aa		3.73	□□□□□ -1.81
HDAC7-222	ENST00000477937	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.72	□□□□□ -1.81
HDAC7-222	ENST00000477937	KRTAP9-9	Q9BYP9	154 aa		3.71	□□□□□ -1.82
HDAC7-222	ENST00000477937	KRTAP5-1	Q6L8H4	278 aa		3.66	□□□□□ -1.82
HDAC7-222	ENST00000477937	PMAIP1	Q13794	54 aa		3.61	□□□□□ -1.83
HDAC7-222	ENST00000477937	LCE1E	Q5T753	118 aa		3.52	□□□□□ -1.85
HDAC7-222	ENST00000477937	PRAC1	Q96KF2	57 aa		3.45	□□□□□ -1.86
HDAC7-222	ENST00000477937	LCE1B	Q5T7P3	118 aa		3.32	□□□□□ -1.88
HDAC7-222	ENST00000477937	KRTAP4-2	Q9BYR5	136 aa		3.31	□□□□□ -1.88
HDAC7-222	ENST00000477937	LCE1C	Q5T751	118 aa		3.27	□□□□□ -1.89
HDAC7-222	ENST00000477937	PRO0628	Q9UI54	55 aa		3.27	□□□□□ -1.89
HDAC7-222	ENST00000477937	LCE3D	Q9BYE3	92 aa		3.16	□□□□□ -1.9
HDAC7-222	ENST00000477937	KTN1-AS1	Q86SY8	53 aa		3.15	□□□□□ -1.91
HDAC7-222	ENST00000477937	SVIP	Q8NHG7	77 aa		3.04	□□□□□ -1.92
HDAC7-222	ENST00000477937	KRTAP4-12	Q9BQ66	201 aa		3.01	□□□□□ -1.93
HDAC7-222	ENST00000477937	LUZP6	Q538Z0	58 aa		2.98	□□□□□ -1.93
HDAC7-222	ENST00000477937	LCE3E	Q5T5B0	92 aa		2.98	□□□□□ -1.93
HDAC7-222	ENST00000477937	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.96	□□□□□ -1.94
HDAC7-222	ENST00000477937	KRTAP5-11	Q6L8G4	156 aa		2.95	□□□□□ -1.94
HDAC7-222	ENST00000477937	LCE1F	Q5T754	118 aa		2.89	□□□□□ -1.95
HDAC7-222	ENST00000477937	KRTAP21-2	Q3LI59	83 aa		2.73	□□□□□ -1.97
HDAC7-222	ENST00000477937	PHGR1	C9JFL3	82 aa		2.58	□□□□□ -2
HDAC7-222	ENST00000477937	KRTAP4-4	Q9BYR3	166 aa		2.51	□□□□□ -2.01
HDAC7-222	ENST00000477937	MUC19	Q7Z5P9	8384 aa		2.36	□□□□□ -2.03
HDAC7-222	ENST00000477937	NDUFAF8	A1L188	74 aa		2.29	□□□□□ -2.04
HDAC7-222	ENST00000477937	PRM1	P04553	51 aa		2.21	□□□□□ -2.06
HDAC7-222	ENST00000477937	KRTAP21-1	Q3LI58	79 aa		1.97	□□□□□ -2.09
HDAC7-222	ENST00000477937	INE1	O15225	51 aa		1.84	□□□□□ -2.11
HDAC7-222	ENST00000477937		A0A0A0MQY5	61 aa		1.78	□□□□□ -2.12
HDAC7-222	ENST00000477937	MUC16	Q8WXI7	14507 aa		1.62	□□□□□ -2.15
HDAC7-222	ENST00000477937		H3BS24	57 aa		1.12	□□□□□ -2.23

Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms