RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
CMC1-209ENST00000477739 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
CMC1-209ENST00000477739 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
CMC1-209ENST00000477739 MT1GP13640 62 aa3.38□□□□□ -1.87
CMC1-209ENST00000477739 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
CMC1-209ENST00000477739 MT1EP04732 61 aa3.3□□□□□ -1.88
CMC1-209ENST00000477739 MT1LQ93083 61 aa3.3□□□□□ -1.88
CMC1-209ENST00000477739 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
CMC1-209ENST00000477739 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
CMC1-209ENST00000477739 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
CMC1-209ENST00000477739 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
CMC1-209ENST00000477739 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
CMC1-209ENST00000477739 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
CMC1-209ENST00000477739 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
CMC1-209ENST00000477739 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
CMC1-209ENST00000477739 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
CMC1-209ENST00000477739 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
CMC1-209ENST00000477739 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
CMC1-209ENST00000477739 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
CMC1-209ENST00000477739 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
CMC1-209ENST00000477739 MT1MQ8N339 61 aa3.1□□□□□ -1.91
CMC1-209ENST00000477739 KRTAP9-2Q9BYQ4 174 aa3.05□□□□□ -1.92
CMC1-209ENST00000477739 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
CMC1-209ENST00000477739 SPRR2EP22531 72 aa2.99□□□□□ -1.93
CMC1-209ENST00000477739 SPRR2BP35325 72 aa2.99□□□□□ -1.93
CMC1-209ENST00000477739 SPRR2AP35326 72 aa2.99□□□□□ -1.93
CMC1-209ENST00000477739 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.94
CMC1-209ENST00000477739 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
CMC1-209ENST00000477739 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
CMC1-209ENST00000477739 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
CMC1-209ENST00000477739 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
CMC1-209ENST00000477739 PRM1P04553 51 aa2.85□□□□□ -1.95
CMC1-209ENST00000477739 SPRR2DP22532 72 aa2.84□□□□□ -1.95
CMC1-209ENST00000477739 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
CMC1-209ENST00000477739 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
CMC1-209ENST00000477739 MT1AP04731 61 aa2.77□□□□□ -1.97
CMC1-209ENST00000477739 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
CMC1-209ENST00000477739 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
CMC1-209ENST00000477739 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
CMC1-209ENST00000477739 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
CMC1-209ENST00000477739 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
CMC1-209ENST00000477739 MT4P47944 62 aa2.7□□□□□ -1.98
CMC1-209ENST00000477739 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
CMC1-209ENST00000477739 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
CMC1-209ENST00000477739 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
CMC1-209ENST00000477739 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
CMC1-209ENST00000477739 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
CMC1-209ENST00000477739 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
CMC1-209ENST00000477739 MT3P25713 68 aa2.56□□□□□ -2
CMC1-209ENST00000477739 NEBP20929 6669 aa2.5□□□□□ -2.01
CMC1-209ENST00000477739 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
CMC1-209ENST00000477739 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
CMC1-209ENST00000477739 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
CMC1-209ENST00000477739 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
CMC1-209ENST00000477739 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
CMC1-209ENST00000477739 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CMC1-209ENST00000477739 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
CMC1-209ENST00000477739 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
CMC1-209ENST00000477739 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.05
CMC1-209ENST00000477739 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
CMC1-209ENST00000477739 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
CMC1-209ENST00000477739 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
CMC1-209ENST00000477739 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
CMC1-209ENST00000477739 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
CMC1-209ENST00000477739 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
CMC1-209ENST00000477739 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
CMC1-209ENST00000477739 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
CMC1-209ENST00000477739 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
CMC1-209ENST00000477739 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
CMC1-209ENST00000477739 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
CMC1-209ENST00000477739 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CMC1-209ENST00000477739 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
CMC1-209ENST00000477739 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
CMC1-209ENST00000477739 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CMC1-209ENST00000477739 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CMC1-209ENST00000477739 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.14
CMC1-209ENST00000477739 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
CMC1-209ENST00000477739 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms