RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
SMIM4-203ENST00000477703 MT1LQ93083 61 aa6.84□□□□□ -1.31
SMIM4-203ENST00000477703 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
SMIM4-203ENST00000477703 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
SMIM4-203ENST00000477703 KRTAP4-12Q9BQ66 201 aa6.76□□□□□ -1.33
SMIM4-203ENST00000477703 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
SMIM4-203ENST00000477703 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
SMIM4-203ENST00000477703 H3BS24 57 aa6.69□□□□□ -1.34
SMIM4-203ENST00000477703 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
SMIM4-203ENST00000477703 KRTAP9-6A8MVA2 160 aa6.62□□□□□ -1.35
SMIM4-203ENST00000477703 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
SMIM4-203ENST00000477703 KRTAP19-3Q7Z4W3 81 aa6.59□□□□□ -1.35
SMIM4-203ENST00000477703 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
SMIM4-203ENST00000477703 MT1GP13640 62 aa6.54□□□□□ -1.36
SMIM4-203ENST00000477703 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
SMIM4-203ENST00000477703 MT1MQ8N339 61 aa6.5□□□□□ -1.37
SMIM4-203ENST00000477703 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
SMIM4-203ENST00000477703 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
SMIM4-203ENST00000477703 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
SMIM4-203ENST00000477703 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
SMIM4-203ENST00000477703 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
SMIM4-203ENST00000477703 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
SMIM4-203ENST00000477703 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
SMIM4-203ENST00000477703 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
SMIM4-203ENST00000477703 NEBP20929 6669 aa6.23□□□□□ -1.41
SMIM4-203ENST00000477703 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
SMIM4-203ENST00000477703 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
SMIM4-203ENST00000477703 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
SMIM4-203ENST00000477703 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
SMIM4-203ENST00000477703 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
SMIM4-203ENST00000477703 SPRR2EP22531 72 aa6.14□□□□□ -1.43
SMIM4-203ENST00000477703 SPRR2BP35325 72 aa6.14□□□□□ -1.43
SMIM4-203ENST00000477703 SPRR2AP35326 72 aa6.14□□□□□ -1.43
SMIM4-203ENST00000477703 DSTQ03001 7570 aaKnown RBP6.13□□□□□ -1.43
SMIM4-203ENST00000477703 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
SMIM4-203ENST00000477703 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
SMIM4-203ENST00000477703 SPRR2DP22532 72 aa5.9□□□□□ -1.47
SMIM4-203ENST00000477703 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
SMIM4-203ENST00000477703 INE1O15225 51 aa5.81□□□□□ -1.48
SMIM4-203ENST00000477703 MT1AP04731 61 aa5.78□□□□□ -1.48
SMIM4-203ENST00000477703 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
SMIM4-203ENST00000477703 KRTAP2-2Q9BYT5 123 aa5.65□□□□□ -1.5
SMIM4-203ENST00000477703 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
SMIM4-203ENST00000477703 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
SMIM4-203ENST00000477703 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
SMIM4-203ENST00000477703 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
SMIM4-203ENST00000477703 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
SMIM4-203ENST00000477703 MT3P25713 68 aa5.2□□□□□ -1.58
SMIM4-203ENST00000477703 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
SMIM4-203ENST00000477703 MT4P47944 62 aa5.15□□□□□ -1.58
SMIM4-203ENST00000477703 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
SMIM4-203ENST00000477703 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
SMIM4-203ENST00000477703 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
SMIM4-203ENST00000477703 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
SMIM4-203ENST00000477703 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
SMIM4-203ENST00000477703 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
SMIM4-203ENST00000477703 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
SMIM4-203ENST00000477703 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
SMIM4-203ENST00000477703 PRM1P04553 51 aa4.59□□□□□ -1.67
SMIM4-203ENST00000477703 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
SMIM4-203ENST00000477703 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
SMIM4-203ENST00000477703 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
SMIM4-203ENST00000477703 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
SMIM4-203ENST00000477703 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
SMIM4-203ENST00000477703 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
SMIM4-203ENST00000477703 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
SMIM4-203ENST00000477703 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
SMIM4-203ENST00000477703 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
SMIM4-203ENST00000477703 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
SMIM4-203ENST00000477703 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
SMIM4-203ENST00000477703 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
SMIM4-203ENST00000477703 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
SMIM4-203ENST00000477703 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SMIM4-203ENST00000477703 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
SMIM4-203ENST00000477703 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
SMIM4-203ENST00000477703 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
SMIM4-203ENST00000477703 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 60.2 ms