RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
TPRN-203ENST00000477345 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
TPRN-203ENST00000477345 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
TPRN-203ENST00000477345 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
TPRN-203ENST00000477345 KRTAP12-4P60329 112 aa4.34□□□□□ -1.72
TPRN-203ENST00000477345 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
TPRN-203ENST00000477345 MT1GP13640 62 aa4.32□□□□□ -1.72
TPRN-203ENST00000477345 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
TPRN-203ENST00000477345 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
TPRN-203ENST00000477345 MT1LQ93083 61 aa4.23□□□□□ -1.73
TPRN-203ENST00000477345 MT1EP04732 61 aa4.2□□□□□ -1.74
TPRN-203ENST00000477345 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
TPRN-203ENST00000477345 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
TPRN-203ENST00000477345 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
TPRN-203ENST00000477345 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
TPRN-203ENST00000477345 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
TPRN-203ENST00000477345 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
TPRN-203ENST00000477345 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
TPRN-203ENST00000477345 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
TPRN-203ENST00000477345 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
TPRN-203ENST00000477345 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
TPRN-203ENST00000477345 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
TPRN-203ENST00000477345 MT1MQ8N339 61 aa3.96□□□□□ -1.78
TPRN-203ENST00000477345 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
TPRN-203ENST00000477345 PRM1P04553 51 aa3.93□□□□□ -1.78
TPRN-203ENST00000477345 KRTAP9-6A0A140TA67 174 aa3.93□□□□□ -1.78
TPRN-203ENST00000477345 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
TPRN-203ENST00000477345 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
TPRN-203ENST00000477345 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
TPRN-203ENST00000477345 SPRR2EP22531 72 aa3.78□□□□□ -1.8
TPRN-203ENST00000477345 SPRR2BP35325 72 aa3.78□□□□□ -1.8
TPRN-203ENST00000477345 SPRR2AP35326 72 aa3.78□□□□□ -1.8
TPRN-203ENST00000477345 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
TPRN-203ENST00000477345 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
TPRN-203ENST00000477345 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
TPRN-203ENST00000477345 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.81
TPRN-203ENST00000477345 MT1AP04731 61 aa3.63□□□□□ -1.83
TPRN-203ENST00000477345 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
TPRN-203ENST00000477345 SPRR2DP22532 72 aa3.59□□□□□ -1.83
TPRN-203ENST00000477345 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
TPRN-203ENST00000477345 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
TPRN-203ENST00000477345 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
TPRN-203ENST00000477345 MT4P47944 62 aa3.38□□□□□ -1.87
TPRN-203ENST00000477345 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
TPRN-203ENST00000477345 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
TPRN-203ENST00000477345 NEBP20929 6669 aa3.26□□□□□ -1.89
TPRN-203ENST00000477345 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
TPRN-203ENST00000477345 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
TPRN-203ENST00000477345 MT3P25713 68 aa3.2□□□□□ -1.9
TPRN-203ENST00000477345 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
TPRN-203ENST00000477345 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
TPRN-203ENST00000477345 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
TPRN-203ENST00000477345 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
TPRN-203ENST00000477345 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
TPRN-203ENST00000477345 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
TPRN-203ENST00000477345 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
TPRN-203ENST00000477345 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
TPRN-203ENST00000477345 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
TPRN-203ENST00000477345 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
TPRN-203ENST00000477345 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
TPRN-203ENST00000477345 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
TPRN-203ENST00000477345 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
TPRN-203ENST00000477345 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
TPRN-203ENST00000477345 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
TPRN-203ENST00000477345 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
TPRN-203ENST00000477345 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
TPRN-203ENST00000477345 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
TPRN-203ENST00000477345 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
TPRN-203ENST00000477345 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
TPRN-203ENST00000477345 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
TPRN-203ENST00000477345 KRTAP5-8O75690 187 aa2.34□□□□□ -2.04
TPRN-203ENST00000477345 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
TPRN-203ENST00000477345 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
TPRN-203ENST00000477345 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
TPRN-203ENST00000477345 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
TPRN-203ENST00000477345 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
TPRN-203ENST00000477345 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
TPRN-203ENST00000477345 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms