RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 WDFY4Q6ZS81 3184 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 MYO9AB2RTY4 2548 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 MT2AP02795 61 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 MT1GP13640 62 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 KRTAP19-7Q3SYF9 63 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 FAT1Q14517 4588 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 LRP1BQ9NZR2 4599 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 DNAH8Q96JB1 4490 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 DMDP11532 3685 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 CSMD2Q7Z408 3487 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 DCHS1Q96JQ0 3298 aa0.12□□□□□ -2.39
NPHP3-207ENST00000476742 FAT4Q6V0I7 4981 aa0.11□□□□□ -2.39
NPHP3-207ENST00000476742 VPS13CQ709C8 3753 aa0.11□□□□□ -2.39
NPHP3-207ENST00000476742 DNAH9Q9NYC9 4486 aa0.11□□□□□ -2.39
NPHP3-207ENST00000476742 KRTAP19-8Q3LI54 63 aa0.11□□□□□ -2.39
NPHP3-207ENST00000476742 MT1MQ8N339 61 aa0.11□□□□□ -2.39
NPHP3-207ENST00000476742 EYSQ5T1H1 3165 aa0.1□□□□□ -2.39
NPHP3-207ENST00000476742 SZT2Q5T011 3432 aa0.1□□□□□ -2.39
NPHP3-207ENST00000476742 FAT3Q8TDW7 4589 aa0.1□□□□□ -2.39
NPHP3-207ENST00000476742 CFAP47Q6ZTR5 3102 aa0.09□□□□□ -2.39
NPHP3-207ENST00000476742 LRP2P98164 4655 aa0.09□□□□□ -2.39
NPHP3-207ENST00000476742 KRTAP6-1Q3LI64 71 aa0.09□□□□□ -2.4
NPHP3-207ENST00000476742 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.4
NPHP3-207ENST00000476742 HERC1Q15751 4861 aa0.09□□□□□ -2.4
NPHP3-207ENST00000476742 EP400Q96L91 3159 aa0.09□□□□□ -2.4
NPHP3-207ENST00000476742 APOBP04114 4563 aaKnown RBP0.08□□□□□ -2.4
NPHP3-207ENST00000476742 XIRP2A4UGR9 3374 aa0.08□□□□□ -2.4
NPHP3-207ENST00000476742 LOC400499M0QZD8 3231 aa0.08□□□□□ -2.4
NPHP3-207ENST00000476742 SPEGQ15772 3267 aa0.08□□□□□ -2.4
NPHP3-207ENST00000476742 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
NPHP3-207ENST00000476742 PCLOQ9Y6V0 5065 aa0.08□□□□□ -2.4
NPHP3-207ENST00000476742 PLECQ15149 4684 aaKnown RBP0.08□□□□□ -2.4
NPHP3-207ENST00000476742 KMT2CQ8NEZ4 4911 aaKnown RBP0.08□□□□□ -2.4
NPHP3-207ENST00000476742 DNAH10Q8IVF4 4471 aa0.07□□□□□ -2.4
NPHP3-207ENST00000476742 PCNTO95613 3336 aa0.07□□□□□ -2.4
NPHP3-207ENST00000476742 MUC3AQ02505 3323 aa0.07□□□□□ -2.4
NPHP3-207ENST00000476742 MT1FP04733 61 aa0.07□□□□□ -2.4
NPHP3-207ENST00000476742 GOLGB1Q14789 3259 aaKnown RBP0.07□□□□□ -2.4
NPHP3-207ENST00000476742 DNAH17Q9UFH2 4485 aa0.06□□□□□ -2.4
NPHP3-207ENST00000476742 ASPMQ8IZT6 3477 aa0.06□□□□□ -2.4
NPHP3-207ENST00000476742 MT1BP07438 61 aa0.05□□□□□ -2.4
NPHP3-207ENST00000476742 MT4P47944 62 aa0.05□□□□□ -2.4
NPHP3-207ENST00000476742 DNAH5Q8TE73 4624 aa0.05□□□□□ -2.4
NPHP3-207ENST00000476742 VPS13AQ96RL7 3174 aa0.05□□□□□ -2.4
NPHP3-207ENST00000476742 MYO15AQ9UKN7 3530 aa0.05□□□□□ -2.4
NPHP3-207ENST00000476742 RYR1P21817 5038 aa0.05□□□□□ -2.4
NPHP3-207ENST00000476742 UNC80Q8N2C7 3258 aa0.04□□□□□ -2.4
NPHP3-207ENST00000476742 VCANP13611 3396 aa0.04□□□□□ -2.4
NPHP3-207ENST00000476742 KRTAP20-2Q3LI61 65 aa0.04□□□□□ -2.4
NPHP3-207ENST00000476742 USP34Q70CQ2 3546 aa0.04□□□□□ -2.4
NPHP3-207ENST00000476742 DYNC1H1Q14204 4646 aaKnown RBP0.04□□□□□ -2.4
NPHP3-207ENST00000476742 USH2AO75445 5202 aa0.04□□□□□ -2.4
NPHP3-207ENST00000476742 STARD9Q9P2P6 4700 aa0.04□□□□□ -2.4
NPHP3-207ENST00000476742 MUC17Q685J3 4493 aa0.03□□□□□ -2.4
NPHP3-207ENST00000476742 MUC2Q02817 5179 aa0.03□□□□□ -2.41
NPHP3-207ENST00000476742 UTRNP46939 3433 aa0.02□□□□□ -2.41
NPHP3-207ENST00000476742 UBR4Q5T4S7 5183 aa0.01□□□□□ -2.41
NPHP3-207ENST00000476742 KRTAP19-2Q3LHN2 52 aa0.01□□□□□ -2.41
NPHP3-207ENST00000476742 CENPFP49454 3210 aa0.01□□□□□ -2.41
NPHP3-207ENST00000476742 BRCA2P51587 3418 aa0□□□□□ -2.41
NPHP3-207ENST00000476742 DNHD1Q96M86 4753 aa0□□□□□ -2.41
NPHP3-207ENST00000476742 MUC12Q9UKN1 5478 aa-0.01□□□□□ -2.41
NPHP3-207ENST00000476742 DNAH14Q0VDD8 3507 aa-0.02□□□□□ -2.41
NPHP3-207ENST00000476742 WDFY3Q8IZQ1 3526 aa-0.02□□□□□ -2.41
NPHP3-207ENST00000476742 BIRC6Q9NR09 4857 aa-0.02□□□□□ -2.41
NPHP3-207ENST00000476742 HERC2O95714 4834 aa-0.04□□□□□ -2.42
NPHP3-207ENST00000476742 RYR3Q15413 4870 aa-0.04□□□□□ -2.42
NPHP3-207ENST00000476742 DSTQ03001 7570 aaKnown RBP-0.04□□□□□ -2.42
NPHP3-207ENST00000476742 HYDINQ4G0P3 5121 aa-0.04□□□□□ -2.42
NPHP3-207ENST00000476742 KIAA1109Q2LD37 5005 aa-0.05□□□□□ -2.42
NPHP3-207ENST00000476742 RNF213Q63HN8 5207 aa-0.06□□□□□ -2.42
NPHP3-207ENST00000476742 EPPK1P58107 5090 aaKnown RBP-0.06□□□□□ -2.42
NPHP3-207ENST00000476742 CDH23Q9H251 3354 aa-0.06□□□□□ -2.42
NPHP3-207ENST00000476742 RYR2Q92736 4967 aa-0.07□□□□□ -2.42
NPHP3-207ENST00000476742 KRTAP19-6Q3LI70 58 aa-0.09□□□□□ -2.42
NPHP3-207ENST00000476742 KRTAP20-1Q3LI63 56 aa-0.1□□□□□ -2.43
NPHP3-207ENST00000476742 ABCA13Q86UQ4 5058 aa-0.13□□□□□ -2.43
NPHP3-207ENST00000476742 NEBP20929 6669 aa-0.19□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 93.4 ms