RNA–Protein interactions for RNA: ENST00000476589.1

NLGN3-204, Transcript of neuroligin 3, humanhuman

TSL 1 (best)

Gene NLGN3, Length 3,153 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3-204ENST00000476589 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
NLGN3-204ENST00000476589 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
NLGN3-204ENST00000476589 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
NLGN3-204ENST00000476589 MT1GP13640 62 aa4.52□□□□□ -1.69
NLGN3-204ENST00000476589 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
NLGN3-204ENST00000476589 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
NLGN3-204ENST00000476589 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
NLGN3-204ENST00000476589 MUC12Q9UKN1 5478 aa4.4□□□□□ -1.7
NLGN3-204ENST00000476589 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
NLGN3-204ENST00000476589 MT1MQ8N339 61 aa4.32□□□□□ -1.72
NLGN3-204ENST00000476589 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
NLGN3-204ENST00000476589 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
NLGN3-204ENST00000476589 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
NLGN3-204ENST00000476589 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
NLGN3-204ENST00000476589 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
NLGN3-204ENST00000476589 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
NLGN3-204ENST00000476589 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
NLGN3-204ENST00000476589 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
NLGN3-204ENST00000476589 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
NLGN3-204ENST00000476589 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
NLGN3-204ENST00000476589 PRM1P04553 51 aa4.04□□□□□ -1.76
NLGN3-204ENST00000476589 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
NLGN3-204ENST00000476589 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
NLGN3-204ENST00000476589 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
NLGN3-204ENST00000476589 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
NLGN3-204ENST00000476589 MT1AP04731 61 aa4.01□□□□□ -1.77
NLGN3-204ENST00000476589 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
NLGN3-204ENST00000476589 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
NLGN3-204ENST00000476589 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
NLGN3-204ENST00000476589 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
NLGN3-204ENST00000476589 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
NLGN3-204ENST00000476589 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
NLGN3-204ENST00000476589 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
NLGN3-204ENST00000476589 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
NLGN3-204ENST00000476589 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
NLGN3-204ENST00000476589 SPRR2EP22531 72 aa3.65□□□□□ -1.82
NLGN3-204ENST00000476589 SPRR2BP35325 72 aa3.65□□□□□ -1.82
NLGN3-204ENST00000476589 SPRR2AP35326 72 aa3.65□□□□□ -1.82
NLGN3-204ENST00000476589 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
NLGN3-204ENST00000476589 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
NLGN3-204ENST00000476589 MT3P25713 68 aa3.53□□□□□ -1.84
NLGN3-204ENST00000476589 SPRR2DP22532 72 aa3.47□□□□□ -1.85
NLGN3-204ENST00000476589 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
NLGN3-204ENST00000476589 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
NLGN3-204ENST00000476589 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
NLGN3-204ENST00000476589 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
NLGN3-204ENST00000476589 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
NLGN3-204ENST00000476589 MT4P47944 62 aa3.17□□□□□ -1.9
NLGN3-204ENST00000476589 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
NLGN3-204ENST00000476589 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
NLGN3-204ENST00000476589 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
NLGN3-204ENST00000476589 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
NLGN3-204ENST00000476589 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
NLGN3-204ENST00000476589 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
NLGN3-204ENST00000476589 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
NLGN3-204ENST00000476589 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.94
NLGN3-204ENST00000476589 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
NLGN3-204ENST00000476589 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
NLGN3-204ENST00000476589 NEBP20929 6669 aa2.85□□□□□ -1.95
NLGN3-204ENST00000476589 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
NLGN3-204ENST00000476589 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
NLGN3-204ENST00000476589 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.97
NLGN3-204ENST00000476589 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
NLGN3-204ENST00000476589 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
NLGN3-204ENST00000476589 LCE1CQ5T751 118 aa2.56□□□□□ -2
NLGN3-204ENST00000476589 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2.01
NLGN3-204ENST00000476589 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
NLGN3-204ENST00000476589 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
NLGN3-204ENST00000476589 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
NLGN3-204ENST00000476589 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
NLGN3-204ENST00000476589 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
NLGN3-204ENST00000476589 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
NLGN3-204ENST00000476589 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
NLGN3-204ENST00000476589 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
NLGN3-204ENST00000476589 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
NLGN3-204ENST00000476589 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
NLGN3-204ENST00000476589 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
NLGN3-204ENST00000476589 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 42 ms