RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
CCDC7-206ENST00000476558 KRTAP4-7Q9BYR0 210 aa7.97□□□□□ -1.13
CCDC7-206ENST00000476558 KRTAP19-3Q7Z4W3 81 aa7.9□□□□□ -1.14
CCDC7-206ENST00000476558 SPRR2FQ96RM1 72 aa7.9□□□□□ -1.14
CCDC7-206ENST00000476558 MUC12Q9UKN1 5478 aa7.88□□□□□ -1.15
CCDC7-206ENST00000476558 MT1GP13640 62 aa7.86□□□□□ -1.15
CCDC7-206ENST00000476558 KRTAP9-6A8MVA2 160 aa7.85□□□□□ -1.15
CCDC7-206ENST00000476558 KRTAP5-9P26371 169 aa7.79□□□□□ -1.16
CCDC7-206ENST00000476558 MT1MQ8N339 61 aa7.79□□□□□ -1.16
CCDC7-206ENST00000476558 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
CCDC7-206ENST00000476558 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
CCDC7-206ENST00000476558 H3BS24 57 aa7.69□□□□□ -1.18
CCDC7-206ENST00000476558 KRTAP4-3Q9BYR4 195 aa7.68□□□□□ -1.18
CCDC7-206ENST00000476558 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
CCDC7-206ENST00000476558 LCE1AQ5T7P2 110 aa7.57□□□□□ -1.2
CCDC7-206ENST00000476558 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
CCDC7-206ENST00000476558 MDN1Q9NU22 5596 aa7.46□□□□□ -1.21
CCDC7-206ENST00000476558 NEBP20929 6669 aa7.42□□□□□ -1.22
CCDC7-206ENST00000476558 SPRR2EP22531 72 aa7.41□□□□□ -1.22
CCDC7-206ENST00000476558 SPRR2BP35325 72 aa7.41□□□□□ -1.22
CCDC7-206ENST00000476558 SPRR2AP35326 72 aa7.41□□□□□ -1.22
CCDC7-206ENST00000476558 KRTAP2-3P0C7H8 128 aa7.35□□□□□ -1.23
CCDC7-206ENST00000476558 KRTAP2-4Q9BYR9 128 aa7.35□□□□□ -1.23
CCDC7-206ENST00000476558 KRTAP2-1Q9BYU5 128 aa7.35□□□□□ -1.23
CCDC7-206ENST00000476558 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
CCDC7-206ENST00000476558 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
CCDC7-206ENST00000476558 DSTQ03001 7570 aaKnown RBP7.29□□□□□ -1.24
CCDC7-206ENST00000476558 SPRR2DP22532 72 aa7.13□□□□□ -1.27
CCDC7-206ENST00000476558 KRTAP5-5Q701N2 237 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-206ENST00000476558 MT1AP04731 61 aa6.92□□□□□ -1.3
CCDC7-206ENST00000476558 KRTAP6-1Q3LI64 71 aa6.89□□□□□ -1.31
CCDC7-206ENST00000476558 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
CCDC7-206ENST00000476558 INE1O15225 51 aa6.83□□□□□ -1.32
CCDC7-206ENST00000476558 KRTAP2-2Q9BYT5 123 aa6.71□□□□□ -1.34
CCDC7-206ENST00000476558 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
CCDC7-206ENST00000476558 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
CCDC7-206ENST00000476558 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
CCDC7-206ENST00000476558 GPR98Q8WXG9 6306 aa6.46□□□□□ -1.38
CCDC7-206ENST00000476558 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
CCDC7-206ENST00000476558 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
CCDC7-206ENST00000476558 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
CCDC7-206ENST00000476558 KRTAP6-2Q3LI66 62 aa6.29□□□□□ -1.4
CCDC7-206ENST00000476558 MT3P25713 68 aa6.24□□□□□ -1.41
CCDC7-206ENST00000476558 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
CCDC7-206ENST00000476558 MT4P47944 62 aa6.2□□□□□ -1.42
CCDC7-206ENST00000476558 LCE3DQ9BYE3 92 aa6.19□□□□□ -1.42
CCDC7-206ENST00000476558 KRTAP20-2Q3LI61 65 aa6.12□□□□□ -1.43
CCDC7-206ENST00000476558 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
CCDC7-206ENST00000476558 LCE3EQ5T5B0 92 aa6.05□□□□□ -1.44
CCDC7-206ENST00000476558 KRTAP5-2Q701N4 177 aa6.03□□□□□ -1.44
CCDC7-206ENST00000476558 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
CCDC7-206ENST00000476558 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
CCDC7-206ENST00000476558 AHNAK2Q8IVF2 5795 aa5.76□□□□□ -1.49
CCDC7-206ENST00000476558 KRTAP5-10Q6L8G5 202 aa5.74□□□□□ -1.49
CCDC7-206ENST00000476558 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
CCDC7-206ENST00000476558 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
CCDC7-206ENST00000476558 PRM1P04553 51 aa5.4□□□□□ -1.54
CCDC7-206ENST00000476558 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
CCDC7-206ENST00000476558 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
CCDC7-206ENST00000476558 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
CCDC7-206ENST00000476558 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
CCDC7-206ENST00000476558 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
CCDC7-206ENST00000476558 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
CCDC7-206ENST00000476558 KRTAP5-8O75690 187 aa5.06□□□□□ -1.6
CCDC7-206ENST00000476558 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
CCDC7-206ENST00000476558 LCE1CQ5T751 118 aa5.03□□□□□ -1.6
CCDC7-206ENST00000476558 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
CCDC7-206ENST00000476558 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
CCDC7-206ENST00000476558 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-206ENST00000476558 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
CCDC7-206ENST00000476558 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
CCDC7-206ENST00000476558 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
CCDC7-206ENST00000476558 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
CCDC7-206ENST00000476558 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CCDC7-206ENST00000476558 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
CCDC7-206ENST00000476558 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
CCDC7-206ENST00000476558 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
CCDC7-206ENST00000476558 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 63.3 ms