RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
SYF2-204ENST00000476231 SPRR2FQ96RM1 72 aa6.58□□□□□ -1.36
SYF2-204ENST00000476231 INE1O15225 51 aa6.57□□□□□ -1.36
SYF2-204ENST00000476231 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
SYF2-204ENST00000476231 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
SYF2-204ENST00000476231 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
SYF2-204ENST00000476231 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
SYF2-204ENST00000476231 MT1GP13640 62 aa6.51□□□□□ -1.37
SYF2-204ENST00000476231 KRTAP5-9P26371 169 aa6.47□□□□□ -1.37
SYF2-204ENST00000476231 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
SYF2-204ENST00000476231 MT1MQ8N339 61 aa6.43□□□□□ -1.38
SYF2-204ENST00000476231 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
SYF2-204ENST00000476231 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
SYF2-204ENST00000476231 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
SYF2-204ENST00000476231 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
SYF2-204ENST00000476231 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
SYF2-204ENST00000476231 KRTAP4-3Q9BYR4 195 aa6.3□□□□□ -1.4
SYF2-204ENST00000476231 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
SYF2-204ENST00000476231 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
SYF2-204ENST00000476231 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
SYF2-204ENST00000476231 SPRR2EP22531 72 aa6.21□□□□□ -1.42
SYF2-204ENST00000476231 SPRR2BP35325 72 aa6.21□□□□□ -1.42
SYF2-204ENST00000476231 SPRR2AP35326 72 aa6.21□□□□□ -1.42
SYF2-204ENST00000476231 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
SYF2-204ENST00000476231 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
SYF2-204ENST00000476231 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
SYF2-204ENST00000476231 SPRR2DP22532 72 aa5.98□□□□□ -1.45
SYF2-204ENST00000476231 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
SYF2-204ENST00000476231 NEBP20929 6669 aa5.81□□□□□ -1.48
SYF2-204ENST00000476231 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
SYF2-204ENST00000476231 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
SYF2-204ENST00000476231 MT1AP04731 61 aa5.72□□□□□ -1.49
SYF2-204ENST00000476231 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
SYF2-204ENST00000476231 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
SYF2-204ENST00000476231 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
SYF2-204ENST00000476231 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
SYF2-204ENST00000476231 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
SYF2-204ENST00000476231 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
SYF2-204ENST00000476231 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
SYF2-204ENST00000476231 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
SYF2-204ENST00000476231 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
SYF2-204ENST00000476231 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
SYF2-204ENST00000476231 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
SYF2-204ENST00000476231 LCE3EQ5T5B0 92 aa5.2□□□□□ -1.58
SYF2-204ENST00000476231 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
SYF2-204ENST00000476231 MT3P25713 68 aa5.18□□□□□ -1.58
SYF2-204ENST00000476231 MT4P47944 62 aa5.18□□□□□ -1.58
SYF2-204ENST00000476231 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
SYF2-204ENST00000476231 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
SYF2-204ENST00000476231 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
SYF2-204ENST00000476231 HMCN1Q96RW7 5635 aa5.02□□□□□ -1.61
SYF2-204ENST00000476231 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
SYF2-204ENST00000476231 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
SYF2-204ENST00000476231 PRM1P04553 51 aa4.8□□□□□ -1.64
SYF2-204ENST00000476231 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
SYF2-204ENST00000476231 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
SYF2-204ENST00000476231 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
SYF2-204ENST00000476231 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
SYF2-204ENST00000476231 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
SYF2-204ENST00000476231 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
SYF2-204ENST00000476231 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
SYF2-204ENST00000476231 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
SYF2-204ENST00000476231 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
SYF2-204ENST00000476231 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
SYF2-204ENST00000476231 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
SYF2-204ENST00000476231 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SYF2-204ENST00000476231 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
SYF2-204ENST00000476231 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
SYF2-204ENST00000476231 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
SYF2-204ENST00000476231 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
SYF2-204ENST00000476231 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
SYF2-204ENST00000476231 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
SYF2-204ENST00000476231 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
SYF2-204ENST00000476231 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SYF2-204ENST00000476231 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
SYF2-204ENST00000476231 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.92
SYF2-204ENST00000476231 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SYF2-204ENST00000476231 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms