RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
VARS2-207ENST00000476162 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
VARS2-207ENST00000476162 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
VARS2-207ENST00000476162 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
VARS2-207ENST00000476162 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
VARS2-207ENST00000476162 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
VARS2-207ENST00000476162 MT1GP13640 62 aa5.28□□□□□ -1.56
VARS2-207ENST00000476162 MT1MQ8N339 61 aa5.27□□□□□ -1.57
VARS2-207ENST00000476162 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
VARS2-207ENST00000476162 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
VARS2-207ENST00000476162 MACF1Q9UPN3 7388 aaKnown RBP5.22□□□□□ -1.57
VARS2-207ENST00000476162 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
VARS2-207ENST00000476162 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
VARS2-207ENST00000476162 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
VARS2-207ENST00000476162 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
VARS2-207ENST00000476162 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
VARS2-207ENST00000476162 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
VARS2-207ENST00000476162 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
VARS2-207ENST00000476162 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
VARS2-207ENST00000476162 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
VARS2-207ENST00000476162 SPRR2EP22531 72 aa4.82□□□□□ -1.64
VARS2-207ENST00000476162 SPRR2BP35325 72 aa4.82□□□□□ -1.64
VARS2-207ENST00000476162 SPRR2AP35326 72 aa4.82□□□□□ -1.64
VARS2-207ENST00000476162 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
VARS2-207ENST00000476162 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
VARS2-207ENST00000476162 MT1AP04731 61 aa4.7□□□□□ -1.66
VARS2-207ENST00000476162 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
VARS2-207ENST00000476162 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
VARS2-207ENST00000476162 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
VARS2-207ENST00000476162 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
VARS2-207ENST00000476162 SPRR2DP22532 72 aa4.61□□□□□ -1.67
VARS2-207ENST00000476162 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
VARS2-207ENST00000476162 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.68
VARS2-207ENST00000476162 PRM1P04553 51 aa4.45□□□□□ -1.7
VARS2-207ENST00000476162 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
VARS2-207ENST00000476162 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
VARS2-207ENST00000476162 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
VARS2-207ENST00000476162 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
VARS2-207ENST00000476162 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
VARS2-207ENST00000476162 NEBP20929 6669 aa4.29□□□□□ -1.72
VARS2-207ENST00000476162 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
VARS2-207ENST00000476162 MT3P25713 68 aa4.24□□□□□ -1.73
VARS2-207ENST00000476162 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
VARS2-207ENST00000476162 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
VARS2-207ENST00000476162 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
VARS2-207ENST00000476162 MT4P47944 62 aa4.07□□□□□ -1.76
VARS2-207ENST00000476162 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
VARS2-207ENST00000476162 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
VARS2-207ENST00000476162 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
VARS2-207ENST00000476162 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
VARS2-207ENST00000476162 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
VARS2-207ENST00000476162 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
VARS2-207ENST00000476162 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
VARS2-207ENST00000476162 KRTAP5-3Q6L8H2 238 aa3.8□□□□□ -1.8
VARS2-207ENST00000476162 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
VARS2-207ENST00000476162 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
VARS2-207ENST00000476162 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
VARS2-207ENST00000476162 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
VARS2-207ENST00000476162 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
VARS2-207ENST00000476162 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
VARS2-207ENST00000476162 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
VARS2-207ENST00000476162 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
VARS2-207ENST00000476162 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
VARS2-207ENST00000476162 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.9
VARS2-207ENST00000476162 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
VARS2-207ENST00000476162 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
VARS2-207ENST00000476162 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
VARS2-207ENST00000476162 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
VARS2-207ENST00000476162 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
VARS2-207ENST00000476162 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
VARS2-207ENST00000476162 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
VARS2-207ENST00000476162 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
VARS2-207ENST00000476162 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
VARS2-207ENST00000476162 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
VARS2-207ENST00000476162 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
VARS2-207ENST00000476162 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
VARS2-207ENST00000476162 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
VARS2-207ENST00000476162 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 213.3 ms