RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 HMCN2Q8NDA2 5059 aa1.14□□□□□ -2.23
LSM2-211ENST00000475835 MT1AP04731 61 aa1.13□□□□□ -2.23
LSM2-211ENST00000475835 KRTAP4-8A0A0G2JLE6 195 aa1.12□□□□□ -2.23
LSM2-211ENST00000475835 KRTAP4-8Q9BYQ9 185 aa1.12□□□□□ -2.23
LSM2-211ENST00000475835 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
LSM2-211ENST00000475835 MT1LQ93083 61 aa1.11□□□□□ -2.23
LSM2-211ENST00000475835 PCLOQ9Y6V0 5065 aa1.1□□□□□ -2.23
LSM2-211ENST00000475835 MT1EP04732 61 aa1.1□□□□□ -2.23
LSM2-211ENST00000475835 LCE3EQ5T5B0 92 aa1.1□□□□□ -2.23
LSM2-211ENST00000475835 KRTAP4-7Q9BYR0 210 aa1.1□□□□□ -2.23
LSM2-211ENST00000475835 KRTAP5-5Q701N2 237 aaPredicted RBP1.08□□□□□ -2.24
LSM2-211ENST00000475835 LCE3DQ9BYE3 92 aa1.06□□□□□ -2.24
LSM2-211ENST00000475835 CRCT1Q9UGL9 99 aa1.06□□□□□ -2.24
LSM2-211ENST00000475835 MUC2Q02817 5179 aa1.04□□□□□ -2.24
LSM2-211ENST00000475835 RNF213Q63HN8 5207 aa1.04□□□□□ -2.24
LSM2-211ENST00000475835 MT1GP13640 62 aa1.04□□□□□ -2.24
LSM2-211ENST00000475835 SPRR2BP35325 72 aa1.04□□□□□ -2.24
LSM2-211ENST00000475835 SPRR2AP35326 72 aa1.04□□□□□ -2.24
LSM2-211ENST00000475835 FAT4Q6V0I7 4981 aa1.04□□□□□ -2.24
LSM2-211ENST00000475835 LCE4AQ5TA78 99 aa1.03□□□□□ -2.24
LSM2-211ENST00000475835 MT1MQ8N339 61 aa1.03□□□□□ -2.24
LSM2-211ENST00000475835 LOC100996750A0A140TA64 210 aa1.02□□□□□ -2.25
LSM2-211ENST00000475835 KRTAP19-6Q3LI70 58 aa1.02□□□□□ -2.25
LSM2-211ENST00000475835 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
LSM2-211ENST00000475835 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
LSM2-211ENST00000475835 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
LSM2-211ENST00000475835 UBR4Q5T4S7 5183 aa1.02□□□□□ -2.25
LSM2-211ENST00000475835 SPRR2DP22532 72 aa1.01□□□□□ -2.25
LSM2-211ENST00000475835 SYNE1Q8NF91 8797 aaKnown RBP1.01□□□□□ -2.25
LSM2-211ENST00000475835 LCE3BQ5TA77 95 aa1□□□□□ -2.25
LSM2-211ENST00000475835 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
LSM2-211ENST00000475835 SPRR2EP22531 72 aa0.96□□□□□ -2.26
LSM2-211ENST00000475835 KRTAP4-9Q9BYQ8 210 aa0.94□□□□□ -2.26
LSM2-211ENST00000475835 KRTAP6-1Q3LI64 71 aa0.93□□□□□ -2.26
LSM2-211ENST00000475835 SSPOA2VEC9 5147 aa0.92□□□□□ -2.26
LSM2-211ENST00000475835 USH2AO75445 5202 aa0.91□□□□□ -2.26
LSM2-211ENST00000475835 GPR98Q8WXG9 6306 aa0.89□□□□□ -2.27
LSM2-211ENST00000475835 KMT2DO14686 5537 aa0.89□□□□□ -2.27
LSM2-211ENST00000475835 LCE1CQ5T751 118 aa0.87□□□□□ -2.27
LSM2-211ENST00000475835 LCE1BQ5T7P3 118 aa0.87□□□□□ -2.27
LSM2-211ENST00000475835 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
LSM2-211ENST00000475835 KRTAP5-9P26371 169 aa0.84□□□□□ -2.27
LSM2-211ENST00000475835 FCGBPQ9Y6R7 5405 aaPredicted RBP0.81□□□□□ -2.28
LSM2-211ENST00000475835 DSTQ03001 7570 aaKnown RBP0.78□□□□□ -2.28
LSM2-211ENST00000475835 MUC12Q9UKN1 5478 aa0.77□□□□□ -2.29
LSM2-211ENST00000475835 KRTAP4-12Q9BQ66 201 aa0.77□□□□□ -2.29
LSM2-211ENST00000475835 KRTAP4-11Q9BYQ6 195 aa0.77□□□□□ -2.29
LSM2-211ENST00000475835 OBSCNQ5VST9 7968 aa0.76□□□□□ -2.29
LSM2-211ENST00000475835 MACF1Q9UPN3 7388 aaKnown RBP0.75□□□□□ -2.29
LSM2-211ENST00000475835 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.75□□□□□ -2.29
LSM2-211ENST00000475835 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
LSM2-211ENST00000475835 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
LSM2-211ENST00000475835 KRTAP5-4Q6L8H1 288 aa0.74□□□□□ -2.29
LSM2-211ENST00000475835 FSIP2Q5CZC0 6907 aa0.74□□□□□ -2.29
LSM2-211ENST00000475835 MT4P47944 62 aa0.73□□□□□ -2.29
LSM2-211ENST00000475835 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
LSM2-211ENST00000475835 KRTAP5-1Q6L8H4 278 aa0.72□□□□□ -2.29
LSM2-211ENST00000475835 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
LSM2-211ENST00000475835 KRTAP5-2Q701N4 177 aa0.71□□□□□ -2.3
LSM2-211ENST00000475835 KRTAP4-6Q9BYQ5 205 aa0.7□□□□□ -2.3
LSM2-211ENST00000475835 MDN1Q9NU22 5596 aa0.69□□□□□ -2.3
LSM2-211ENST00000475835 HMCN1Q96RW7 5635 aa0.68□□□□□ -2.3
LSM2-211ENST00000475835 KRTAP20-1Q3LI63 56 aa0.67□□□□□ -2.3
LSM2-211ENST00000475835 MUC19Q7Z5P9 8384 aa0.65□□□□□ -2.31
LSM2-211ENST00000475835 KRTAP5-3Q6L8H2 238 aa0.65□□□□□ -2.31
LSM2-211ENST00000475835 MUC5BQ9HC84 5762 aaPredicted RBP0.65□□□□□ -2.31
LSM2-211ENST00000475835 KRTAP5-8O75690 187 aa0.63□□□□□ -2.31
LSM2-211ENST00000475835 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
LSM2-211ENST00000475835 KRTAP4-2Q9BYR5 136 aa0.61□□□□□ -2.31
LSM2-211ENST00000475835 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
LSM2-211ENST00000475835 NEBP20929 6669 aa0.59□□□□□ -2.31
LSM2-211ENST00000475835 KRTAP21-2Q3LI59 83 aa0.58□□□□□ -2.32
LSM2-211ENST00000475835 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.58□□□□□ -2.32
LSM2-211ENST00000475835 KRTAP4-4Q9BYR3 166 aa0.58□□□□□ -2.32
LSM2-211ENST00000475835 KRTAP5-11Q6L8G4 156 aa0.54□□□□□ -2.32
LSM2-211ENST00000475835 KRTAP5-7Q6L8G8 165 aa0.53□□□□□ -2.32
LSM2-211ENST00000475835 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
LSM2-211ENST00000475835 MUC16Q8WXI7 14507 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 98.6 ms