RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
CALD1-217ENST00000475772 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
CALD1-217ENST00000475772 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
CALD1-217ENST00000475772 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
CALD1-217ENST00000475772 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
CALD1-217ENST00000475772 SCGB1A1P11684 91 aa3.73□□□□□ -1.81
CALD1-217ENST00000475772 MT1MQ8N339 61 aa3.73□□□□□ -1.81
CALD1-217ENST00000475772 A0A0D9SG42 100 aa3.72□□□□□ -1.81
CALD1-217ENST00000475772 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
CALD1-217ENST00000475772 MT1LQ93083 61 aa3.69□□□□□ -1.82
CALD1-217ENST00000475772 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
CALD1-217ENST00000475772 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
CALD1-217ENST00000475772 J3QR89 54 aa3.61□□□□□ -1.83
CALD1-217ENST00000475772 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
CALD1-217ENST00000475772 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
CALD1-217ENST00000475772 SNURFQ9Y675 71 aa3.59□□□□□ -1.83
CALD1-217ENST00000475772 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
CALD1-217ENST00000475772 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
CALD1-217ENST00000475772 SPANXA2-OT1Q8N9U9 137 aa3.56□□□□□ -1.84
CALD1-217ENST00000475772 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
CALD1-217ENST00000475772 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
CALD1-217ENST00000475772 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
CALD1-217ENST00000475772 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
CALD1-217ENST00000475772 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
CALD1-217ENST00000475772 A0A1B0GU33 70 aa3.49□□□□□ -1.85
CALD1-217ENST00000475772 COA5Q86WW8 74 aa3.48□□□□□ -1.85
CALD1-217ENST00000475772 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
CALD1-217ENST00000475772 K7ERU9 68 aa3.47□□□□□ -1.85
CALD1-217ENST00000475772 SEC61GP60059 68 aa3.45□□□□□ -1.86
CALD1-217ENST00000475772 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
CALD1-217ENST00000475772 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
CALD1-217ENST00000475772 TNP1P09430 55 aa3.42□□□□□ -1.86
CALD1-217ENST00000475772 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
CALD1-217ENST00000475772 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
CALD1-217ENST00000475772 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
CALD1-217ENST00000475772 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
CALD1-217ENST00000475772 SMIM26A0A096LP01 95 aa3.35□□□□□ -1.87
CALD1-217ENST00000475772 A0A1B0GU69 56 aa3.28□□□□□ -1.88
CALD1-217ENST00000475772 H7BZZ5 65 aa3.26□□□□□ -1.89
CALD1-217ENST00000475772 COX7CP15954 63 aa3.26□□□□□ -1.89
CALD1-217ENST00000475772 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
CALD1-217ENST00000475772 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
CALD1-217ENST00000475772 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
CALD1-217ENST00000475772 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
CALD1-217ENST00000475772 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
CALD1-217ENST00000475772 MT1AP04731 61 aa3.12□□□□□ -1.91
CALD1-217ENST00000475772 ANAPC13Q9BS18 74 aa3.12□□□□□ -1.91
CALD1-217ENST00000475772 CCDC179H3BU77 68 aa3.1□□□□□ -1.91
CALD1-217ENST00000475772 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.91
CALD1-217ENST00000475772 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
CALD1-217ENST00000475772 LINC01558Q9Y6Z2 57 aa3.07□□□□□ -1.92
CALD1-217ENST00000475772 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
CALD1-217ENST00000475772 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
CALD1-217ENST00000475772 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CALD1-217ENST00000475772 UQCR11O14957 56 aa3□□□□□ -1.93
CALD1-217ENST00000475772 ATP5EP56381 51 aaPredicted RBP3□□□□□ -1.93
CALD1-217ENST00000475772 TMEM258P61165 79 aa2.93□□□□□ -1.94
CALD1-217ENST00000475772 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
CALD1-217ENST00000475772 K7ERS5 55 aa2.83□□□□□ -1.96
CALD1-217ENST00000475772 PSPHP1O15172 72 aa2.82□□□□□ -1.96
CALD1-217ENST00000475772 Q1T7F1 81 aa2.76□□□□□ -1.97
CALD1-217ENST00000475772 V9GYY9 64 aa2.75□□□□□ -1.97
CALD1-217ENST00000475772 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
CALD1-217ENST00000475772 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CALD1-217ENST00000475772 A6NED7 52 aa2.7□□□□□ -1.98
CALD1-217ENST00000475772 CDC42SE1Q9NRR8 79 aa2.69□□□□□ -1.98
CALD1-217ENST00000475772 ROMO1P60602 79 aa2.66□□□□□ -1.98
CALD1-217ENST00000475772 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
CALD1-217ENST00000475772 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
CALD1-217ENST00000475772 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
CALD1-217ENST00000475772 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
CALD1-217ENST00000475772 LUZP6Q538Z0 58 aa2.09□□□□□ -2.07
CALD1-217ENST00000475772 PRO0628Q9UI54 55 aa2.08□□□□□ -2.08
CALD1-217ENST00000475772 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
CALD1-217ENST00000475772 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
CALD1-217ENST00000475772 PRM1P04553 51 aa1.37□□□□□ -2.19
CALD1-217ENST00000475772 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
CALD1-217ENST00000475772 INE1O15225 51 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 55.9 ms