RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	PP632	Q6XCG6	107 aa		5.85	□□□□□ -1.47
VPS8-222	ENST00000475580	MIR22HG	Q0VDD5	57 aa		5.84	□□□□□ -1.47
VPS8-222	ENST00000475580	PSPHP1	O15172	72 aa		5.78	□□□□□ -1.48
VPS8-222	ENST00000475580		Q1T7F1	81 aa		5.78	□□□□□ -1.48
VPS8-222	ENST00000475580		V9GYY9	64 aa		5.77	□□□□□ -1.49
VPS8-222	ENST00000475580	KRTAP4-3	Q9BYR4	195 aa		5.75	□□□□□ -1.49
VPS8-222	ENST00000475580	KRTAP12-3	P60328	96 aa		5.73	□□□□□ -1.49
VPS8-222	ENST00000475580	KRTAP4-12	Q9BQ66	201 aa		5.73	□□□□□ -1.49
VPS8-222	ENST00000475580	KRTAP4-9	Q9BYQ8	210 aa		5.73	□□□□□ -1.49
VPS8-222	ENST00000475580	KRTAP25-1	Q3LHN0	102 aa		5.69	□□□□□ -1.5
VPS8-222	ENST00000475580		K7ERS5	55 aa		5.66	□□□□□ -1.5
VPS8-222	ENST00000475580	KRTAP4-7	Q9BYR0	210 aa		5.65	□□□□□ -1.5
VPS8-222	ENST00000475580	LCE1D	Q5T752	114 aa		5.61	□□□□□ -1.51
VPS8-222	ENST00000475580	LCE4A	Q5TA78	99 aa		5.61	□□□□□ -1.51
VPS8-222	ENST00000475580	KRTAP5-4	Q6L8H1	288 aa		5.57	□□□□□ -1.52
VPS8-222	ENST00000475580	KRTAP9-9	Q9BYP9	154 aa		5.57	□□□□□ -1.52
VPS8-222	ENST00000475580	KRTAP9-4	Q9BYQ2	154 aa		5.57	□□□□□ -1.52
VPS8-222	ENST00000475580		A6NED7	52 aa		5.56	□□□□□ -1.52
VPS8-222	ENST00000475580	HMCN1	Q96RW7	5635 aa		5.55	□□□□□ -1.52
VPS8-222	ENST00000475580	MT4	P47944	62 aa		5.54	□□□□□ -1.52
VPS8-222	ENST00000475580	RPS28	P62857	69 aa	Known RBP	5.52	□□□□□ -1.53
VPS8-222	ENST00000475580	GPR98	Q8WXG9	6306 aa		5.52	□□□□□ -1.53
VPS8-222	ENST00000475580	KRTAP23-1	A1A580	65 aa		5.49	□□□□□ -1.53
VPS8-222	ENST00000475580	PCP4	P48539	62 aa		5.48	□□□□□ -1.53
VPS8-222	ENST00000475580	CDC42SE1	Q9NRR8	79 aa		5.41	□□□□□ -1.54
VPS8-222	ENST00000475580	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.4	□□□□□ -1.54
VPS8-222	ENST00000475580	KRTAP19-4	Q3LI73	84 aa		5.38	□□□□□ -1.55
VPS8-222	ENST00000475580	KRTAP15-1	Q3LI76	137 aa		5.38	□□□□□ -1.55
VPS8-222	ENST00000475580	AHNAK2	Q8IVF2	5795 aa		5.36	□□□□□ -1.55
VPS8-222	ENST00000475580	ROMO1	P60602	79 aa		5.35	□□□□□ -1.55
VPS8-222	ENST00000475580	LCE3C	Q5T5A8	94 aa		5.29	□□□□□ -1.56
VPS8-222	ENST00000475580	KRTAP20-2	Q3LI61	65 aa		5.24	□□□□□ -1.57
VPS8-222	ENST00000475580	SPRR5	A0A1B0GTR4	108 aa		5.21	□□□□□ -1.58
VPS8-222	ENST00000475580	KRTAP5-10	Q6L8G5	202 aa		5.19	□□□□□ -1.58
VPS8-222	ENST00000475580	KRTAP12-4	P60329	112 aa		5.17	□□□□□ -1.58
VPS8-222	ENST00000475580	SYNE1	Q8NF91	8797 aa	Known RBP	5.15	□□□□□ -1.59
VPS8-222	ENST00000475580	KRTAP5-3	Q6L8H2	238 aa		5.1	□□□□□ -1.59
VPS8-222	ENST00000475580	KRTAP4-2	Q9BYR5	136 aa		5.07	□□□□□ -1.6
VPS8-222	ENST00000475580	KRTAP9-6	A8MVA2	160 aa		5.05	□□□□□ -1.6
VPS8-222	ENST00000475580		H3BS24	57 aa		5.03	□□□□□ -1.6
VPS8-222	ENST00000475580	MT1A	P04731	61 aa		5.02	□□□□□ -1.61
VPS8-222	ENST00000475580	KRTAP6-1	Q3LI64	71 aa		5.01	□□□□□ -1.61
VPS8-222	ENST00000475580	KRTAP4-11	Q9BYQ6	195 aa		5	□□□□□ -1.61
VPS8-222	ENST00000475580	KRTAP5-7	Q6L8G8	165 aa		4.97	□□□□□ -1.61
VPS8-222	ENST00000475580	KRTAP5-2	Q701N4	177 aa		4.9	□□□□□ -1.63
VPS8-222	ENST00000475580	BRK1	Q8WUW1	75 aa		4.82	□□□□□ -1.64
VPS8-222	ENST00000475580	KRTAP6-2	Q3LI66	62 aa		4.75	□□□□□ -1.65
VPS8-222	ENST00000475580	KRTAP5-8	O75690	187 aa		4.61	□□□□□ -1.67
VPS8-222	ENST00000475580	MT3	P25713	68 aa		4.57	□□□□□ -1.68
VPS8-222	ENST00000475580	PMAIP1	Q13794	54 aa		4.52	□□□□□ -1.69
VPS8-222	ENST00000475580	OBSCN	Q5VST9	7968 aa		4.45	□□□□□ -1.7
VPS8-222	ENST00000475580	PRAC1	Q96KF2	57 aa		4.42	□□□□□ -1.7
VPS8-222	ENST00000475580	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.41	□□□□□ -1.7
VPS8-222	ENST00000475580	AHNAK	Q09666	5890 aa	Known RBP	4.41	□□□□□ -1.7
VPS8-222	ENST00000475580	KRTAP5-1	Q6L8H4	278 aa		4.38	□□□□□ -1.71
VPS8-222	ENST00000475580	MUC5AC	P98088	5654 aa		4.36	□□□□□ -1.71
VPS8-222	ENST00000475580	PRO0628	Q9UI54	55 aa		4.22	□□□□□ -1.73
VPS8-222	ENST00000475580	LCE1E	Q5T753	118 aa		4.19	□□□□□ -1.74
VPS8-222	ENST00000475580	KTN1-AS1	Q86SY8	53 aa		4.04	□□□□□ -1.76
VPS8-222	ENST00000475580	LCE1B	Q5T7P3	118 aa		3.92	□□□□□ -1.78
VPS8-222	ENST00000475580	LCE1C	Q5T751	118 aa		3.89	□□□□□ -1.79
VPS8-222	ENST00000475580	SVIP	Q8NHG7	77 aa		3.84	□□□□□ -1.79
VPS8-222	ENST00000475580	LCE3D	Q9BYE3	92 aa		3.81	□□□□□ -1.8
VPS8-222	ENST00000475580	LUZP6	Q538Z0	58 aa		3.62	□□□□□ -1.83
VPS8-222	ENST00000475580	LCE3E	Q5T5B0	92 aa		3.6	□□□□□ -1.83
VPS8-222	ENST00000475580	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-222	ENST00000475580	KRTAP5-11	Q6L8G4	156 aa		3.52	□□□□□ -1.85
VPS8-222	ENST00000475580	LCE1F	Q5T754	118 aa		3.39	□□□□□ -1.87
VPS8-222	ENST00000475580	KRTAP21-2	Q3LI59	83 aa		3.31	□□□□□ -1.88
VPS8-222	ENST00000475580	PHGR1	C9JFL3	82 aa		3.04	□□□□□ -1.92
VPS8-222	ENST00000475580	KRTAP4-4	Q9BYR3	166 aa		3	□□□□□ -1.93
VPS8-222	ENST00000475580	NDUFAF8	A1L188	74 aa		2.96	□□□□□ -1.94
VPS8-222	ENST00000475580	MUC19	Q7Z5P9	8384 aa		2.75	□□□□□ -1.97
VPS8-222	ENST00000475580	PRM1	P04553	51 aa		2.75	□□□□□ -1.97
VPS8-222	ENST00000475580		A0A0A0MQY5	61 aa		2.51	□□□□□ -2.01
VPS8-222	ENST00000475580	INE1	O15225	51 aa		2.34	□□□□□ -2.03
VPS8-222	ENST00000475580	KRTAP21-1	Q3LI58	79 aa		2.26	□□□□□ -2.05
VPS8-222	ENST00000475580	MUC16	Q8WXI7	14507 aa		2.02	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 257 ms