RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 APOBP04114 4563 aaKnown RBP1.02□□□□□ -2.25
SDHB-205ENST00000475506 MT1HL1P0DM35 61 aa1.02□□□□□ -2.25
SDHB-205ENST00000475506 DNAH5Q8TE73 4624 aa1.02□□□□□ -2.25
SDHB-205ENST00000475506 FAT2Q9NYQ8 4349 aa1.01□□□□□ -2.25
SDHB-205ENST00000475506 TNXBP22105 4242 aa1□□□□□ -2.25
SDHB-205ENST00000475506 LRP1BQ9NZR2 4599 aa0.99□□□□□ -2.25
SDHB-205ENST00000475506 STARD9Q9P2P6 4700 aa0.99□□□□□ -2.25
SDHB-205ENST00000475506 PLECQ15149 4684 aaKnown RBP0.98□□□□□ -2.25
SDHB-205ENST00000475506 DYNC1H1Q14204 4646 aaKnown RBP0.97□□□□□ -2.25
SDHB-205ENST00000475506 KRTAP19-8Q3LI54 63 aa0.97□□□□□ -2.25
SDHB-205ENST00000475506 FAT3Q8TDW7 4589 aa0.96□□□□□ -2.26
SDHB-205ENST00000475506 KRTAP19-2Q3LHN2 52 aa0.96□□□□□ -2.26
SDHB-205ENST00000475506 KRTAP19-5Q3LI72 72 aa0.96□□□□□ -2.26
SDHB-205ENST00000475506 MT1XP80297 61 aa0.95□□□□□ -2.26
SDHB-205ENST00000475506 FAT1Q14517 4588 aa0.93□□□□□ -2.26
SDHB-205ENST00000475506 PRM1P04553 51 aa0.91□□□□□ -2.26
SDHB-205ENST00000475506 MT1AP04731 61 aa0.9□□□□□ -2.27
SDHB-205ENST00000475506 MT1EP04732 61 aa0.9□□□□□ -2.27
SDHB-205ENST00000475506 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
SDHB-205ENST00000475506 MT1BP07438 61 aa0.89□□□□□ -2.27
SDHB-205ENST00000475506 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
SDHB-205ENST00000475506 MT1LQ93083 61 aa0.89□□□□□ -2.27
SDHB-205ENST00000475506 MT2AP02795 61 aa0.88□□□□□ -2.27
SDHB-205ENST00000475506 MT1FP04733 61 aa0.87□□□□□ -2.27
SDHB-205ENST00000475506 LPAP08519 4548 aa0.87□□□□□ -2.27
SDHB-205ENST00000475506 MUC17Q685J3 4493 aa0.85□□□□□ -2.27
SDHB-205ENST00000475506 HERC1Q15751 4861 aa0.83□□□□□ -2.28
SDHB-205ENST00000475506 MT1HP80294 61 aa0.83□□□□□ -2.28
SDHB-205ENST00000475506 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
SDHB-205ENST00000475506 DNHD1Q96M86 4753 aa0.81□□□□□ -2.28
SDHB-205ENST00000475506 LRP2P98164 4655 aa0.81□□□□□ -2.28
SDHB-205ENST00000475506 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
SDHB-205ENST00000475506 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
SDHB-205ENST00000475506 MT1GP13640 62 aa0.8□□□□□ -2.28
SDHB-205ENST00000475506 SPRR2AP35326 72 aa0.8□□□□□ -2.28
SDHB-205ENST00000475506 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
SDHB-205ENST00000475506 SPRR2BP35325 72 aa0.79□□□□□ -2.28
SDHB-205ENST00000475506 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
SDHB-205ENST00000475506 SPRR2DP22532 72 aa0.76□□□□□ -2.29
SDHB-205ENST00000475506 HMCN2Q8NDA2 5059 aa0.76□□□□□ -2.29
SDHB-205ENST00000475506 SPRR2EP22531 72 aa0.75□□□□□ -2.29
SDHB-205ENST00000475506 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
SDHB-205ENST00000475506 MT1MQ8N339 61 aa0.75□□□□□ -2.29
SDHB-205ENST00000475506 HYDINQ4G0P3 5121 aa0.74□□□□□ -2.29
SDHB-205ENST00000475506 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
SDHB-205ENST00000475506 KMT2CQ8NEZ4 4911 aaKnown RBP0.71□□□□□ -2.3
SDHB-205ENST00000475506 MUC2Q02817 5179 aa0.71□□□□□ -2.3
SDHB-205ENST00000475506 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
SDHB-205ENST00000475506 UBR4Q5T4S7 5183 aa0.69□□□□□ -2.3
SDHB-205ENST00000475506 RYR2Q92736 4967 aa0.68□□□□□ -2.3
SDHB-205ENST00000475506 HERC2O95714 4834 aa0.66□□□□□ -2.3
SDHB-205ENST00000475506 PCLOQ9Y6V0 5065 aa0.66□□□□□ -2.3
SDHB-205ENST00000475506 RYR1P21817 5038 aa0.66□□□□□ -2.3
SDHB-205ENST00000475506 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
SDHB-205ENST00000475506 KIAA1109Q2LD37 5005 aa0.64□□□□□ -2.31
SDHB-205ENST00000475506 RYR3Q15413 4870 aa0.64□□□□□ -2.31
SDHB-205ENST00000475506 BIRC6Q9NR09 4857 aa0.64□□□□□ -2.31
SDHB-205ENST00000475506 KRTAP19-6Q3LI70 58 aa0.62□□□□□ -2.31
SDHB-205ENST00000475506 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
SDHB-205ENST00000475506 MACF1Q9UPN3 7388 aaKnown RBP0.6□□□□□ -2.31
SDHB-205ENST00000475506 FAT4Q6V0I7 4981 aa0.6□□□□□ -2.31
SDHB-205ENST00000475506 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
SDHB-205ENST00000475506 EPPK1P58107 5090 aaKnown RBP0.58□□□□□ -2.32
SDHB-205ENST00000475506 ABCA13Q86UQ4 5058 aa0.57□□□□□ -2.32
SDHB-205ENST00000475506 KRTAP20-1Q3LI63 56 aa0.57□□□□□ -2.32
SDHB-205ENST00000475506 SSPOA2VEC9 5147 aa0.54□□□□□ -2.32
SDHB-205ENST00000475506 FSIP2Q5CZC0 6907 aa0.54□□□□□ -2.32
SDHB-205ENST00000475506 KMT2DO14686 5537 aa0.52□□□□□ -2.33
SDHB-205ENST00000475506 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
SDHB-205ENST00000475506 USH2AO75445 5202 aa0.51□□□□□ -2.33
SDHB-205ENST00000475506 NEBP20929 6669 aa0.5□□□□□ -2.33
SDHB-205ENST00000475506 RNF213Q63HN8 5207 aa0.5□□□□□ -2.33
SDHB-205ENST00000475506 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
SDHB-205ENST00000475506 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
SDHB-205ENST00000475506 DSTQ03001 7570 aaKnown RBP0.41□□□□□ -2.34
SDHB-205ENST00000475506 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
SDHB-205ENST00000475506 MT4P47944 62 aa0.4□□□□□ -2.35
SDHB-205ENST00000475506 MUC12Q9UKN1 5478 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms