RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 MT1LQ93083 61 aa4.61□□□□□ -1.67
ARHGEF39-203ENST00000475323 MT1EP04732 61 aa4.58□□□□□ -1.68
ARHGEF39-203ENST00000475323 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
ARHGEF39-203ENST00000475323 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
ARHGEF39-203ENST00000475323 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
ARHGEF39-203ENST00000475323 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
ARHGEF39-203ENST00000475323 MT1GP13640 62 aa4.39□□□□□ -1.71
ARHGEF39-203ENST00000475323 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
ARHGEF39-203ENST00000475323 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
ARHGEF39-203ENST00000475323 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
ARHGEF39-203ENST00000475323 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
ARHGEF39-203ENST00000475323 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
ARHGEF39-203ENST00000475323 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
ARHGEF39-203ENST00000475323 MT1MQ8N339 61 aa4.27□□□□□ -1.73
ARHGEF39-203ENST00000475323 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
ARHGEF39-203ENST00000475323 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
ARHGEF39-203ENST00000475323 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
ARHGEF39-203ENST00000475323 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
ARHGEF39-203ENST00000475323 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
ARHGEF39-203ENST00000475323 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
ARHGEF39-203ENST00000475323 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
ARHGEF39-203ENST00000475323 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
ARHGEF39-203ENST00000475323 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
ARHGEF39-203ENST00000475323 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
ARHGEF39-203ENST00000475323 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
ARHGEF39-203ENST00000475323 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
ARHGEF39-203ENST00000475323 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
ARHGEF39-203ENST00000475323 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.77
ARHGEF39-203ENST00000475323 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.77
ARHGEF39-203ENST00000475323 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
ARHGEF39-203ENST00000475323 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
ARHGEF39-203ENST00000475323 MT1AP04731 61 aa3.87□□□□□ -1.79
ARHGEF39-203ENST00000475323 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
ARHGEF39-203ENST00000475323 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
ARHGEF39-203ENST00000475323 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
ARHGEF39-203ENST00000475323 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
ARHGEF39-203ENST00000475323 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
ARHGEF39-203ENST00000475323 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
ARHGEF39-203ENST00000475323 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
ARHGEF39-203ENST00000475323 PRM1P04553 51 aa3.79□□□□□ -1.8
ARHGEF39-203ENST00000475323 SPRR2EP22531 72 aa3.78□□□□□ -1.8
ARHGEF39-203ENST00000475323 SPRR2BP35325 72 aa3.78□□□□□ -1.8
ARHGEF39-203ENST00000475323 SPRR2AP35326 72 aa3.78□□□□□ -1.8
ARHGEF39-203ENST00000475323 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
ARHGEF39-203ENST00000475323 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
ARHGEF39-203ENST00000475323 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
ARHGEF39-203ENST00000475323 SPRR2DP22532 72 aa3.62□□□□□ -1.83
ARHGEF39-203ENST00000475323 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
ARHGEF39-203ENST00000475323 LCE4AQ5TA78 99 aa3.59□□□□□ -1.84
ARHGEF39-203ENST00000475323 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
ARHGEF39-203ENST00000475323 MT3P25713 68 aa3.41□□□□□ -1.86
ARHGEF39-203ENST00000475323 NEBP20929 6669 aa3.37□□□□□ -1.87
ARHGEF39-203ENST00000475323 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
ARHGEF39-203ENST00000475323 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
ARHGEF39-203ENST00000475323 MT4P47944 62 aa3.22□□□□□ -1.89
ARHGEF39-203ENST00000475323 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
ARHGEF39-203ENST00000475323 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
ARHGEF39-203ENST00000475323 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
ARHGEF39-203ENST00000475323 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
ARHGEF39-203ENST00000475323 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
ARHGEF39-203ENST00000475323 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
ARHGEF39-203ENST00000475323 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
ARHGEF39-203ENST00000475323 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
ARHGEF39-203ENST00000475323 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
ARHGEF39-203ENST00000475323 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
ARHGEF39-203ENST00000475323 LCE1CQ5T751 118 aa2.57□□□□□ -2
ARHGEF39-203ENST00000475323 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
ARHGEF39-203ENST00000475323 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
ARHGEF39-203ENST00000475323 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
ARHGEF39-203ENST00000475323 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
ARHGEF39-203ENST00000475323 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
ARHGEF39-203ENST00000475323 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
ARHGEF39-203ENST00000475323 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
ARHGEF39-203ENST00000475323 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
ARHGEF39-203ENST00000475323 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
ARHGEF39-203ENST00000475323 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
ARHGEF39-203ENST00000475323 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
ARHGEF39-203ENST00000475323 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 109.5 ms