RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
FSCN1-205ENST00000473330 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
FSCN1-205ENST00000473330 LCE2DQ5TA82 110 aaPredicted RBP6.61□□□□□ -1.35
FSCN1-205ENST00000473330 MT1GP13640 62 aa6.59□□□□□ -1.35
FSCN1-205ENST00000473330 MT1MQ8N339 61 aa6.54□□□□□ -1.36
FSCN1-205ENST00000473330 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
FSCN1-205ENST00000473330 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
FSCN1-205ENST00000473330 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
FSCN1-205ENST00000473330 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
FSCN1-205ENST00000473330 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
FSCN1-205ENST00000473330 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
FSCN1-205ENST00000473330 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
FSCN1-205ENST00000473330 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
FSCN1-205ENST00000473330 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
FSCN1-205ENST00000473330 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
FSCN1-205ENST00000473330 DSTQ03001 7570 aaKnown RBP6.13□□□□□ -1.43
FSCN1-205ENST00000473330 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
FSCN1-205ENST00000473330 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
FSCN1-205ENST00000473330 MT1AP04731 61 aa5.98□□□□□ -1.45
FSCN1-205ENST00000473330 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
FSCN1-205ENST00000473330 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
FSCN1-205ENST00000473330 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
FSCN1-205ENST00000473330 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
FSCN1-205ENST00000473330 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
FSCN1-205ENST00000473330 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
FSCN1-205ENST00000473330 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
FSCN1-205ENST00000473330 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
FSCN1-205ENST00000473330 LCE3EQ5T5B0 92 aa5.75□□□□□ -1.49
FSCN1-205ENST00000473330 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
FSCN1-205ENST00000473330 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
FSCN1-205ENST00000473330 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
FSCN1-205ENST00000473330 PRM1P04553 51 aa5.58□□□□□ -1.52
FSCN1-205ENST00000473330 SPRR2EP22531 72 aa5.57□□□□□ -1.52
FSCN1-205ENST00000473330 SPRR2BP35325 72 aa5.57□□□□□ -1.52
FSCN1-205ENST00000473330 SPRR2AP35326 72 aa5.57□□□□□ -1.52
FSCN1-205ENST00000473330 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
FSCN1-205ENST00000473330 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
FSCN1-205ENST00000473330 SPRR2DP22532 72 aa5.32□□□□□ -1.56
FSCN1-205ENST00000473330 MT3P25713 68 aa5.28□□□□□ -1.56
FSCN1-205ENST00000473330 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
FSCN1-205ENST00000473330 NEBP20929 6669 aa5.09□□□□□ -1.59
FSCN1-205ENST00000473330 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
FSCN1-205ENST00000473330 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
FSCN1-205ENST00000473330 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
FSCN1-205ENST00000473330 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
FSCN1-205ENST00000473330 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
FSCN1-205ENST00000473330 MT4P47944 62 aa4.7□□□□□ -1.66
FSCN1-205ENST00000473330 KRTAP5-2Q701N4 177 aa4.69□□□□□ -1.66
FSCN1-205ENST00000473330 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
FSCN1-205ENST00000473330 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
FSCN1-205ENST00000473330 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
FSCN1-205ENST00000473330 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
FSCN1-205ENST00000473330 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
FSCN1-205ENST00000473330 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
FSCN1-205ENST00000473330 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
FSCN1-205ENST00000473330 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
FSCN1-205ENST00000473330 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
FSCN1-205ENST00000473330 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
FSCN1-205ENST00000473330 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
FSCN1-205ENST00000473330 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
FSCN1-205ENST00000473330 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
FSCN1-205ENST00000473330 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
FSCN1-205ENST00000473330 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
FSCN1-205ENST00000473330 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
FSCN1-205ENST00000473330 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
FSCN1-205ENST00000473330 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
FSCN1-205ENST00000473330 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
FSCN1-205ENST00000473330 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
FSCN1-205ENST00000473330 KRTAP21-1Q3LI58 79 aa3.54□□□□□ -1.84
FSCN1-205ENST00000473330 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
FSCN1-205ENST00000473330 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
FSCN1-205ENST00000473330 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
FSCN1-205ENST00000473330 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
FSCN1-205ENST00000473330 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
FSCN1-205ENST00000473330 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
FSCN1-205ENST00000473330 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.9
FSCN1-205ENST00000473330 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
FSCN1-205ENST00000473330 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms