RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FCGBPQ9Y6R7 5405 aaPredicted RBP7.13□□□□□ -1.27
COL18A1-207ENST00000473212 KRTAP19-6Q3LI70 58 aa7.11□□□□□ -1.27
COL18A1-207ENST00000473212 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.27
COL18A1-207ENST00000473212 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
COL18A1-207ENST00000473212 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
COL18A1-207ENST00000473212 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
COL18A1-207ENST00000473212 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.3
COL18A1-207ENST00000473212 MT1GP13640 62 aa6.89□□□□□ -1.31
COL18A1-207ENST00000473212 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
COL18A1-207ENST00000473212 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
COL18A1-207ENST00000473212 MT1MQ8N339 61 aa6.78□□□□□ -1.32
COL18A1-207ENST00000473212 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
COL18A1-207ENST00000473212 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.34
COL18A1-207ENST00000473212 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
COL18A1-207ENST00000473212 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
COL18A1-207ENST00000473212 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
COL18A1-207ENST00000473212 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
COL18A1-207ENST00000473212 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
COL18A1-207ENST00000473212 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
COL18A1-207ENST00000473212 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
COL18A1-207ENST00000473212 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
COL18A1-207ENST00000473212 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
COL18A1-207ENST00000473212 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
COL18A1-207ENST00000473212 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
COL18A1-207ENST00000473212 MT1AP04731 61 aa6.12□□□□□ -1.43
COL18A1-207ENST00000473212 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
COL18A1-207ENST00000473212 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
COL18A1-207ENST00000473212 SPRR2EP22531 72 aa6.04□□□□□ -1.44
COL18A1-207ENST00000473212 SPRR2BP35325 72 aa6.04□□□□□ -1.44
COL18A1-207ENST00000473212 SPRR2AP35326 72 aa6.04□□□□□ -1.44
COL18A1-207ENST00000473212 LCE3DQ9BYE3 92 aa6□□□□□ -1.45
COL18A1-207ENST00000473212 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
COL18A1-207ENST00000473212 KRTAP5-5Q701N2 237 aaPredicted RBP5.95□□□□□ -1.46
COL18A1-207ENST00000473212 LCE3EQ5T5B0 92 aa5.93□□□□□ -1.46
COL18A1-207ENST00000473212 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
COL18A1-207ENST00000473212 KRTAP6-3Q3LI67 103 aa5.79□□□□□ -1.48
COL18A1-207ENST00000473212 PRM1P04553 51 aa5.78□□□□□ -1.48
COL18A1-207ENST00000473212 SPRR2DP22532 72 aa5.78□□□□□ -1.48
COL18A1-207ENST00000473212 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
COL18A1-207ENST00000473212 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
COL18A1-207ENST00000473212 NEBP20929 6669 aa5.53□□□□□ -1.52
COL18A1-207ENST00000473212 MT3P25713 68 aa5.42□□□□□ -1.54
COL18A1-207ENST00000473212 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
COL18A1-207ENST00000473212 MT4P47944 62 aa5.16□□□□□ -1.58
COL18A1-207ENST00000473212 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
COL18A1-207ENST00000473212 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
COL18A1-207ENST00000473212 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
COL18A1-207ENST00000473212 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
COL18A1-207ENST00000473212 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
COL18A1-207ENST00000473212 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
COL18A1-207ENST00000473212 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
COL18A1-207ENST00000473212 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
COL18A1-207ENST00000473212 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
COL18A1-207ENST00000473212 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
COL18A1-207ENST00000473212 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
COL18A1-207ENST00000473212 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
COL18A1-207ENST00000473212 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
COL18A1-207ENST00000473212 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
COL18A1-207ENST00000473212 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
COL18A1-207ENST00000473212 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
COL18A1-207ENST00000473212 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
COL18A1-207ENST00000473212 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
COL18A1-207ENST00000473212 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
COL18A1-207ENST00000473212 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
COL18A1-207ENST00000473212 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
COL18A1-207ENST00000473212 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
COL18A1-207ENST00000473212 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
COL18A1-207ENST00000473212 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
COL18A1-207ENST00000473212 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
COL18A1-207ENST00000473212 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
COL18A1-207ENST00000473212 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
COL18A1-207ENST00000473212 KRTAP21-1Q3LI58 79 aa3.62□□□□□ -1.83
COL18A1-207ENST00000473212 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
COL18A1-207ENST00000473212 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
COL18A1-207ENST00000473212 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
COL18A1-207ENST00000473212 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
COL18A1-207ENST00000473212 PHGR1C9JFL3 82 aa3.09□□□□□ -1.92
COL18A1-207ENST00000473212 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 122.2 ms