RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 MIR22HGQ0VDD5 57 aa6.89□□□□□ -1.31
COMMD1-208ENST00000472729 MT1MQ8N339 61 aa6.87□□□□□ -1.31
COMMD1-208ENST00000472729 V9GYY9 64 aa6.84□□□□□ -1.31
COMMD1-208ENST00000472729 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
COMMD1-208ENST00000472729 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
COMMD1-208ENST00000472729 PSPHP1O15172 72 aa6.76□□□□□ -1.33
COMMD1-208ENST00000472729 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
COMMD1-208ENST00000472729 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
COMMD1-208ENST00000472729 Q1T7F1 81 aa6.68□□□□□ -1.34
COMMD1-208ENST00000472729 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
COMMD1-208ENST00000472729 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
COMMD1-208ENST00000472729 GPR98Q8WXG9 6306 aa6.64□□□□□ -1.35
COMMD1-208ENST00000472729 MT4P47944 62 aa6.64□□□□□ -1.35
COMMD1-208ENST00000472729 A6NED7 52 aa6.58□□□□□ -1.36
COMMD1-208ENST00000472729 HMCN1Q96RW7 5635 aa6.54□□□□□ -1.36
COMMD1-208ENST00000472729 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
COMMD1-208ENST00000472729 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
COMMD1-208ENST00000472729 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
COMMD1-208ENST00000472729 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
COMMD1-208ENST00000472729 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
COMMD1-208ENST00000472729 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
COMMD1-208ENST00000472729 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
COMMD1-208ENST00000472729 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
COMMD1-208ENST00000472729 ROMO1P60602 79 aa6.3□□□□□ -1.4
COMMD1-208ENST00000472729 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
COMMD1-208ENST00000472729 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
COMMD1-208ENST00000472729 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
COMMD1-208ENST00000472729 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
COMMD1-208ENST00000472729 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
COMMD1-208ENST00000472729 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
COMMD1-208ENST00000472729 KRTAP20-2Q3LI61 65 aa6.16□□□□□ -1.42
COMMD1-208ENST00000472729 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
COMMD1-208ENST00000472729 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
COMMD1-208ENST00000472729 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
COMMD1-208ENST00000472729 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
COMMD1-208ENST00000472729 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
COMMD1-208ENST00000472729 MT1AP04731 61 aa5.88□□□□□ -1.47
COMMD1-208ENST00000472729 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
COMMD1-208ENST00000472729 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
COMMD1-208ENST00000472729 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
COMMD1-208ENST00000472729 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
COMMD1-208ENST00000472729 PRO0628Q9UI54 55 aa5.67□□□□□ -1.5
COMMD1-208ENST00000472729 BRK1Q8WUW1 75 aa5.65□□□□□ -1.5
COMMD1-208ENST00000472729 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
COMMD1-208ENST00000472729 KRTAP6-2Q3LI66 62 aa5.6□□□□□ -1.51
COMMD1-208ENST00000472729 MT3P25713 68 aa5.45□□□□□ -1.54
COMMD1-208ENST00000472729 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
COMMD1-208ENST00000472729 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
COMMD1-208ENST00000472729 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
COMMD1-208ENST00000472729 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
COMMD1-208ENST00000472729 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
COMMD1-208ENST00000472729 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
COMMD1-208ENST00000472729 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
COMMD1-208ENST00000472729 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
COMMD1-208ENST00000472729 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
COMMD1-208ENST00000472729 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
COMMD1-208ENST00000472729 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
COMMD1-208ENST00000472729 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
COMMD1-208ENST00000472729 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
COMMD1-208ENST00000472729 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
COMMD1-208ENST00000472729 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
COMMD1-208ENST00000472729 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
COMMD1-208ENST00000472729 H3BS24 57 aa4.27□□□□□ -1.73
COMMD1-208ENST00000472729 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
COMMD1-208ENST00000472729 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
COMMD1-208ENST00000472729 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
COMMD1-208ENST00000472729 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
COMMD1-208ENST00000472729 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
COMMD1-208ENST00000472729 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
COMMD1-208ENST00000472729 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
COMMD1-208ENST00000472729 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
COMMD1-208ENST00000472729 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
COMMD1-208ENST00000472729 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
COMMD1-208ENST00000472729 INE1O15225 51 aa3.48□□□□□ -1.85
COMMD1-208ENST00000472729 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
COMMD1-208ENST00000472729 PRM1P04553 51 aa3.19□□□□□ -1.9
COMMD1-208ENST00000472729 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
COMMD1-208ENST00000472729 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 39.7 ms