RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 MT1LQ93083 61 aa4.58□□□□□ -1.68
SCAMP4-207ENST00000472442 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
SCAMP4-207ENST00000472442 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
SCAMP4-207ENST00000472442 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
SCAMP4-207ENST00000472442 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
SCAMP4-207ENST00000472442 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
SCAMP4-207ENST00000472442 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.71
SCAMP4-207ENST00000472442 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
SCAMP4-207ENST00000472442 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
SCAMP4-207ENST00000472442 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
SCAMP4-207ENST00000472442 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
SCAMP4-207ENST00000472442 MT1GP13640 62 aa4.34□□□□□ -1.71
SCAMP4-207ENST00000472442 MT1MQ8N339 61 aa4.34□□□□□ -1.71
SCAMP4-207ENST00000472442 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
SCAMP4-207ENST00000472442 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
SCAMP4-207ENST00000472442 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
SCAMP4-207ENST00000472442 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
SCAMP4-207ENST00000472442 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
SCAMP4-207ENST00000472442 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
SCAMP4-207ENST00000472442 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.74
SCAMP4-207ENST00000472442 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
SCAMP4-207ENST00000472442 SPRR2EP22531 72 aa4.06□□□□□ -1.76
SCAMP4-207ENST00000472442 SPRR2BP35325 72 aa4.06□□□□□ -1.76
SCAMP4-207ENST00000472442 SPRR2AP35326 72 aa4.06□□□□□ -1.76
SCAMP4-207ENST00000472442 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
SCAMP4-207ENST00000472442 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
SCAMP4-207ENST00000472442 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
SCAMP4-207ENST00000472442 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SCAMP4-207ENST00000472442 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
SCAMP4-207ENST00000472442 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
SCAMP4-207ENST00000472442 SPRR2DP22532 72 aa3.9□□□□□ -1.79
SCAMP4-207ENST00000472442 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SCAMP4-207ENST00000472442 MT1AP04731 61 aa3.85□□□□□ -1.79
SCAMP4-207ENST00000472442 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SCAMP4-207ENST00000472442 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
SCAMP4-207ENST00000472442 NEBP20929 6669 aa3.77□□□□□ -1.81
SCAMP4-207ENST00000472442 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
SCAMP4-207ENST00000472442 PRM1P04553 51 aa3.75□□□□□ -1.81
SCAMP4-207ENST00000472442 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SCAMP4-207ENST00000472442 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
SCAMP4-207ENST00000472442 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
SCAMP4-207ENST00000472442 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
SCAMP4-207ENST00000472442 MT3P25713 68 aa3.46□□□□□ -1.86
SCAMP4-207ENST00000472442 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
SCAMP4-207ENST00000472442 MT4P47944 62 aa3.43□□□□□ -1.86
SCAMP4-207ENST00000472442 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
SCAMP4-207ENST00000472442 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
SCAMP4-207ENST00000472442 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
SCAMP4-207ENST00000472442 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
SCAMP4-207ENST00000472442 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
SCAMP4-207ENST00000472442 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
SCAMP4-207ENST00000472442 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
SCAMP4-207ENST00000472442 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
SCAMP4-207ENST00000472442 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
SCAMP4-207ENST00000472442 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SCAMP4-207ENST00000472442 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
SCAMP4-207ENST00000472442 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
SCAMP4-207ENST00000472442 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
SCAMP4-207ENST00000472442 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
SCAMP4-207ENST00000472442 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
SCAMP4-207ENST00000472442 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
SCAMP4-207ENST00000472442 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
SCAMP4-207ENST00000472442 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
SCAMP4-207ENST00000472442 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SCAMP4-207ENST00000472442 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
SCAMP4-207ENST00000472442 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
SCAMP4-207ENST00000472442 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
SCAMP4-207ENST00000472442 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
SCAMP4-207ENST00000472442 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
SCAMP4-207ENST00000472442 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SCAMP4-207ENST00000472442 GPR98Q8WXG9 6306 aa2.53□□□□□ -2.01
SCAMP4-207ENST00000472442 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
SCAMP4-207ENST00000472442 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
SCAMP4-207ENST00000472442 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
SCAMP4-207ENST00000472442 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
SCAMP4-207ENST00000472442 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
SCAMP4-207ENST00000472442 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
SCAMP4-207ENST00000472442 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 93.1 ms