RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, human

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM9-208	ENST00000472411	MT1L	Q93083	61 aa		3.64	□□□□□ -1.83
TMEM9-208	ENST00000472411	SSPO	A2VEC9	5147 aa		3.63	□□□□□ -1.83
TMEM9-208	ENST00000472411	MT1E	P04732	61 aa		3.62	□□□□□ -1.83
TMEM9-208	ENST00000472411	KRTAP19-4	Q3LI73	84 aa		3.62	□□□□□ -1.83
TMEM9-208	ENST00000472411	KRTAP9-4	Q9BYQ2	154 aa		3.53	□□□□□ -1.84
TMEM9-208	ENST00000472411	KRTAP9-9	Q9BYP9	154 aa		3.53	□□□□□ -1.85
TMEM9-208	ENST00000472411	LOC100996750	A0A140TA64	210 aa		3.49	□□□□□ -1.85
TMEM9-208	ENST00000472411	KRTAP4-6	Q9BYQ5	205 aa		3.49	□□□□□ -1.85
TMEM9-208	ENST00000472411	KRTAP4-3	Q9BYR4	195 aa		3.47	□□□□□ -1.85
TMEM9-208	ENST00000472411	KRTAP19-6	Q3LI70	58 aa		3.45	□□□□□ -1.86
TMEM9-208	ENST00000472411	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.45	□□□□□ -1.86
TMEM9-208	ENST00000472411	MUC12	Q9UKN1	5478 aa		3.45	□□□□□ -1.86
TMEM9-208	ENST00000472411	KRTAP4-12	Q9BQ66	201 aa		3.45	□□□□□ -1.86
TMEM9-208	ENST00000472411	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.44	□□□□□ -1.86
TMEM9-208	ENST00000472411	SYNE2	Q8WXH0	6885 aa	Known RBP	3.44	□□□□□ -1.86
TMEM9-208	ENST00000472411	MT1G	P13640	62 aa		3.43	□□□□□ -1.86
TMEM9-208	ENST00000472411	KRTAP9-2	Q9BYQ4	174 aa		3.43	□□□□□ -1.86
TMEM9-208	ENST00000472411	MACF1	Q9UPN3	7388 aa	Known RBP	3.41	□□□□□ -1.86
TMEM9-208	ENST00000472411	DST	Q03001	7570 aa	Known RBP	3.41	□□□□□ -1.86
TMEM9-208	ENST00000472411	MT1M	Q8N339	61 aa		3.38	□□□□□ -1.87
TMEM9-208	ENST00000472411	KRTAP19-3	Q7Z4W3	81 aa		3.36	□□□□□ -1.87
TMEM9-208	ENST00000472411	LCE3B	Q5TA77	95 aa		3.36	□□□□□ -1.87
TMEM9-208	ENST00000472411	CRCT1	Q9UGL9	99 aa		3.35	□□□□□ -1.87
TMEM9-208	ENST00000472411	KRTAP12-4	P60329	112 aa		3.3	□□□□□ -1.88
TMEM9-208	ENST00000472411	LCE5A	Q5TCM9	118 aa		3.28	□□□□□ -1.88
TMEM9-208	ENST00000472411	MDN1	Q9NU22	5596 aa		3.25	□□□□□ -1.89
TMEM9-208	ENST00000472411	SPRR2F	Q96RM1	72 aa		3.2	□□□□□ -1.9
TMEM9-208	ENST00000472411	SYNE1	Q8NF91	8797 aa	Known RBP	3.17	□□□□□ -1.9
TMEM9-208	ENST00000472411	KRTAP4-9	Q9BYQ8	210 aa		3.16	□□□□□ -1.9
TMEM9-208	ENST00000472411	KRTAP6-1	Q3LI64	71 aa		3.11	□□□□□ -1.91
TMEM9-208	ENST00000472411	OBSCN	Q5VST9	7968 aa		3.1	□□□□□ -1.91
TMEM9-208	ENST00000472411	MT1A	P04731	61 aa		3.1	□□□□□ -1.91
TMEM9-208	ENST00000472411	LCE1D	Q5T752	114 aa		3.07	□□□□□ -1.92
TMEM9-208	ENST00000472411	LCE3D	Q9BYE3	92 aa		3.03	□□□□□ -1.92
TMEM9-208	ENST00000472411	LCE3E	Q5T5B0	92 aa		3	□□□□□ -1.93
TMEM9-208	ENST00000472411	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.97	□□□□□ -1.93
TMEM9-208	ENST00000472411	LCE1A	Q5T7P2	110 aa		2.96	□□□□□ -1.94
TMEM9-208	ENST00000472411	PRM1	P04553	51 aa		2.92	□□□□□ -1.94
TMEM9-208	ENST00000472411	SPRR2E	P22531	72 aa		2.91	□□□□□ -1.94
TMEM9-208	ENST00000472411	KRTAP5-9	P26371	169 aa		2.91	□□□□□ -1.94
TMEM9-208	ENST00000472411	SPRR2B	P35325	72 aa		2.91	□□□□□ -1.94
TMEM9-208	ENST00000472411	SPRR2A	P35326	72 aa		2.91	□□□□□ -1.94
TMEM9-208	ENST00000472411	KRTAP4-11	Q9BYQ6	195 aa		2.9	□□□□□ -1.94
TMEM9-208	ENST00000472411	KRTAP2-2	Q9BYT5	123 aa		2.86	□□□□□ -1.95
TMEM9-208	ENST00000472411	KRTAP6-3	Q3LI67	103 aa		2.85	□□□□□ -1.95
TMEM9-208	ENST00000472411	LCE1F	Q5T754	118 aa		2.83	□□□□□ -1.96
TMEM9-208	ENST00000472411	KRTAP6-2	Q3LI66	62 aa		2.81	□□□□□ -1.96
TMEM9-208	ENST00000472411	KRTAP4-2	Q9BYR5	136 aa		2.8	□□□□□ -1.96
TMEM9-208	ENST00000472411	SPRR2D	P22532	72 aa		2.78	□□□□□ -1.97
TMEM9-208	ENST00000472411	NEB	P20929	6669 aa		2.73	□□□□□ -1.97
TMEM9-208	ENST00000472411	MT3	P25713	68 aa		2.73	□□□□□ -1.97
TMEM9-208	ENST00000472411	LCE1E	Q5T753	118 aa		2.71	□□□□□ -1.98
TMEM9-208	ENST00000472411	MT4	P47944	62 aa		2.57	□□□□□ -2
TMEM9-208	ENST00000472411	KRTAP5-4	Q6L8H1	288 aa		2.55	□□□□□ -2
TMEM9-208	ENST00000472411	HMCN1	Q96RW7	5635 aa		2.47	□□□□□ -2.01
TMEM9-208	ENST00000472411	KRTAP20-1	Q3LI63	56 aa		2.43	□□□□□ -2.02
TMEM9-208	ENST00000472411	KRTAP5-2	Q701N4	177 aa		2.4	□□□□□ -2.02
TMEM9-208	ENST00000472411	KRTAP20-2	Q3LI61	65 aa		2.4	□□□□□ -2.03
TMEM9-208	ENST00000472411	MUC5AC	P98088	5654 aa		2.38	□□□□□ -2.03
TMEM9-208	ENST00000472411	KRTAP5-3	Q6L8H2	238 aa		2.36	□□□□□ -2.03
TMEM9-208	ENST00000472411	LCE1B	Q5T7P3	118 aa		2.21	□□□□□ -2.06
TMEM9-208	ENST00000472411	KRTAP5-10	Q6L8G5	202 aa		2.2	□□□□□ -2.06
TMEM9-208	ENST00000472411	KRTAP5-1	Q6L8H4	278 aa		2.16	□□□□□ -2.06
TMEM9-208	ENST00000472411	LCE1C	Q5T751	118 aa		2.08	□□□□□ -2.08
TMEM9-208	ENST00000472411	AHNAK2	Q8IVF2	5795 aa		2.07	□□□□□ -2.08
TMEM9-208	ENST00000472411	MUC19	Q7Z5P9	8384 aa		2.07	□□□□□ -2.08
TMEM9-208	ENST00000472411	KRTAP5-11	Q6L8G4	156 aa		2.03	□□□□□ -2.08
TMEM9-208	ENST00000472411	KRTAP21-2	Q3LI59	83 aa		2	□□□□□ -2.09
TMEM9-208	ENST00000472411	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.99	□□□□□ -2.09
TMEM9-208	ENST00000472411	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.96	□□□□□ -2.09
TMEM9-208	ENST00000472411	GPR98	Q8WXG9	6306 aa		1.96	□□□□□ -2.1
TMEM9-208	ENST00000472411	KRTAP5-8	O75690	187 aa		1.92	□□□□□ -2.1
TMEM9-208	ENST00000472411	KRTAP4-4	Q9BYR3	166 aa		1.85	□□□□□ -2.11
TMEM9-208	ENST00000472411	KRTAP5-7	Q6L8G8	165 aa		1.85	□□□□□ -2.11
TMEM9-208	ENST00000472411	KRTAP21-1	Q3LI58	79 aa		1.84	□□□□□ -2.11
TMEM9-208	ENST00000472411	AHNAK	Q09666	5890 aa	Known RBP	1.55	□□□□□ -2.16
TMEM9-208	ENST00000472411	PHGR1	C9JFL3	82 aa		1.54	□□□□□ -2.16
TMEM9-208	ENST00000472411	MUC16	Q8WXI7	14507 aa		1.06	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 86.7 ms