RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, humanhuman

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-208ENST00000472411 MT1LQ93083 61 aa3.64□□□□□ -1.83
TMEM9-208ENST00000472411 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
TMEM9-208ENST00000472411 MT1EP04732 61 aa3.62□□□□□ -1.83
TMEM9-208ENST00000472411 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
TMEM9-208ENST00000472411 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
TMEM9-208ENST00000472411 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.85
TMEM9-208ENST00000472411 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
TMEM9-208ENST00000472411 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
TMEM9-208ENST00000472411 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
TMEM9-208ENST00000472411 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
TMEM9-208ENST00000472411 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
TMEM9-208ENST00000472411 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
TMEM9-208ENST00000472411 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
TMEM9-208ENST00000472411 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
TMEM9-208ENST00000472411 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
TMEM9-208ENST00000472411 MT1GP13640 62 aa3.43□□□□□ -1.86
TMEM9-208ENST00000472411 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
TMEM9-208ENST00000472411 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
TMEM9-208ENST00000472411 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
TMEM9-208ENST00000472411 MT1MQ8N339 61 aa3.38□□□□□ -1.87
TMEM9-208ENST00000472411 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
TMEM9-208ENST00000472411 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
TMEM9-208ENST00000472411 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
TMEM9-208ENST00000472411 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
TMEM9-208ENST00000472411 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
TMEM9-208ENST00000472411 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
TMEM9-208ENST00000472411 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
TMEM9-208ENST00000472411 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
TMEM9-208ENST00000472411 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
TMEM9-208ENST00000472411 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
TMEM9-208ENST00000472411 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
TMEM9-208ENST00000472411 MT1AP04731 61 aa3.1□□□□□ -1.91
TMEM9-208ENST00000472411 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
TMEM9-208ENST00000472411 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
TMEM9-208ENST00000472411 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
TMEM9-208ENST00000472411 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
TMEM9-208ENST00000472411 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
TMEM9-208ENST00000472411 PRM1P04553 51 aa2.92□□□□□ -1.94
TMEM9-208ENST00000472411 SPRR2EP22531 72 aa2.91□□□□□ -1.94
TMEM9-208ENST00000472411 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
TMEM9-208ENST00000472411 SPRR2BP35325 72 aa2.91□□□□□ -1.94
TMEM9-208ENST00000472411 SPRR2AP35326 72 aa2.91□□□□□ -1.94
TMEM9-208ENST00000472411 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
TMEM9-208ENST00000472411 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
TMEM9-208ENST00000472411 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
TMEM9-208ENST00000472411 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
TMEM9-208ENST00000472411 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
TMEM9-208ENST00000472411 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
TMEM9-208ENST00000472411 SPRR2DP22532 72 aa2.78□□□□□ -1.97
TMEM9-208ENST00000472411 NEBP20929 6669 aa2.73□□□□□ -1.97
TMEM9-208ENST00000472411 MT3P25713 68 aa2.73□□□□□ -1.97
TMEM9-208ENST00000472411 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
TMEM9-208ENST00000472411 MT4P47944 62 aa2.57□□□□□ -2
TMEM9-208ENST00000472411 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
TMEM9-208ENST00000472411 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
TMEM9-208ENST00000472411 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
TMEM9-208ENST00000472411 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
TMEM9-208ENST00000472411 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
TMEM9-208ENST00000472411 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
TMEM9-208ENST00000472411 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
TMEM9-208ENST00000472411 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
TMEM9-208ENST00000472411 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
TMEM9-208ENST00000472411 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
TMEM9-208ENST00000472411 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
TMEM9-208ENST00000472411 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
TMEM9-208ENST00000472411 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
TMEM9-208ENST00000472411 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
TMEM9-208ENST00000472411 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
TMEM9-208ENST00000472411 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
TMEM9-208ENST00000472411 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.09
TMEM9-208ENST00000472411 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
TMEM9-208ENST00000472411 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
TMEM9-208ENST00000472411 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
TMEM9-208ENST00000472411 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
TMEM9-208ENST00000472411 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
TMEM9-208ENST00000472411 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
TMEM9-208ENST00000472411 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
TMEM9-208ENST00000472411 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 469.5 ms