RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 MT1EP04732 61 aa5.03□□□□□ -1.6
FXR1-209ENST00000472339 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
FXR1-209ENST00000472339 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
FXR1-209ENST00000472339 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
FXR1-209ENST00000472339 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
FXR1-209ENST00000472339 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
FXR1-209ENST00000472339 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
FXR1-209ENST00000472339 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
FXR1-209ENST00000472339 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
FXR1-209ENST00000472339 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
FXR1-209ENST00000472339 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
FXR1-209ENST00000472339 MT1GP13640 62 aa4.72□□□□□ -1.65
FXR1-209ENST00000472339 MT1MQ8N339 61 aa4.68□□□□□ -1.66
FXR1-209ENST00000472339 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
FXR1-209ENST00000472339 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
FXR1-209ENST00000472339 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
FXR1-209ENST00000472339 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
FXR1-209ENST00000472339 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
FXR1-209ENST00000472339 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
FXR1-209ENST00000472339 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
FXR1-209ENST00000472339 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.69
FXR1-209ENST00000472339 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
FXR1-209ENST00000472339 MT1AP04731 61 aa4.42□□□□□ -1.7
FXR1-209ENST00000472339 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
FXR1-209ENST00000472339 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
FXR1-209ENST00000472339 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
FXR1-209ENST00000472339 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
FXR1-209ENST00000472339 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
FXR1-209ENST00000472339 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
FXR1-209ENST00000472339 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
FXR1-209ENST00000472339 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
FXR1-209ENST00000472339 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
FXR1-209ENST00000472339 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
FXR1-209ENST00000472339 PRM1P04553 51 aa4.14□□□□□ -1.75
FXR1-209ENST00000472339 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
FXR1-209ENST00000472339 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
FXR1-209ENST00000472339 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
FXR1-209ENST00000472339 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
FXR1-209ENST00000472339 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
FXR1-209ENST00000472339 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
FXR1-209ENST00000472339 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
FXR1-209ENST00000472339 SPRR2EP22531 72 aa3.88□□□□□ -1.79
FXR1-209ENST00000472339 SPRR2BP35325 72 aa3.88□□□□□ -1.79
FXR1-209ENST00000472339 SPRR2AP35326 72 aa3.88□□□□□ -1.79
FXR1-209ENST00000472339 MT3P25713 68 aa3.82□□□□□ -1.8
FXR1-209ENST00000472339 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
FXR1-209ENST00000472339 SPRR2DP22532 72 aa3.7□□□□□ -1.82
FXR1-209ENST00000472339 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
FXR1-209ENST00000472339 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
FXR1-209ENST00000472339 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
FXR1-209ENST00000472339 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
FXR1-209ENST00000472339 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
FXR1-209ENST00000472339 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
FXR1-209ENST00000472339 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
FXR1-209ENST00000472339 MT4P47944 62 aa3.25□□□□□ -1.89
FXR1-209ENST00000472339 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
FXR1-209ENST00000472339 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
FXR1-209ENST00000472339 NEBP20929 6669 aa3.15□□□□□ -1.91
FXR1-209ENST00000472339 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
FXR1-209ENST00000472339 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
FXR1-209ENST00000472339 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
FXR1-209ENST00000472339 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
FXR1-209ENST00000472339 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
FXR1-209ENST00000472339 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
FXR1-209ENST00000472339 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
FXR1-209ENST00000472339 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
FXR1-209ENST00000472339 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
FXR1-209ENST00000472339 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
FXR1-209ENST00000472339 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
FXR1-209ENST00000472339 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
FXR1-209ENST00000472339 KRTAP5-8O75690 187 aa2.56□□□□□ -2
FXR1-209ENST00000472339 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
FXR1-209ENST00000472339 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
FXR1-209ENST00000472339 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
FXR1-209ENST00000472339 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
FXR1-209ENST00000472339 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
FXR1-209ENST00000472339 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
FXR1-209ENST00000472339 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms