RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
IRF1-208ENST00000472045 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
IRF1-208ENST00000472045 MT1EP04732 61 aa4.1□□□□□ -1.75
IRF1-208ENST00000472045 MT1LQ93083 61 aa4.09□□□□□ -1.76
IRF1-208ENST00000472045 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
IRF1-208ENST00000472045 MT1MQ8N339 61 aa3.98□□□□□ -1.77
IRF1-208ENST00000472045 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
IRF1-208ENST00000472045 MT4P47944 62 aa3.96□□□□□ -1.78
IRF1-208ENST00000472045 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
IRF1-208ENST00000472045 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
IRF1-208ENST00000472045 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
IRF1-208ENST00000472045 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
IRF1-208ENST00000472045 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
IRF1-208ENST00000472045 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
IRF1-208ENST00000472045 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
IRF1-208ENST00000472045 MT3P25713 68 aa3.82□□□□□ -1.8
IRF1-208ENST00000472045 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
IRF1-208ENST00000472045 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
IRF1-208ENST00000472045 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
IRF1-208ENST00000472045 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
IRF1-208ENST00000472045 USH2AO75445 5202 aa3.74□□□□□ -1.81
IRF1-208ENST00000472045 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
IRF1-208ENST00000472045 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
IRF1-208ENST00000472045 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
IRF1-208ENST00000472045 MT1AP04731 61 aa3.66□□□□□ -1.82
IRF1-208ENST00000472045 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
IRF1-208ENST00000472045 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
IRF1-208ENST00000472045 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
IRF1-208ENST00000472045 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
IRF1-208ENST00000472045 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
IRF1-208ENST00000472045 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
IRF1-208ENST00000472045 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
IRF1-208ENST00000472045 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
IRF1-208ENST00000472045 KMT2DO14686 5537 aa3.52□□□□□ -1.85
IRF1-208ENST00000472045 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
IRF1-208ENST00000472045 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
IRF1-208ENST00000472045 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
IRF1-208ENST00000472045 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
IRF1-208ENST00000472045 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
IRF1-208ENST00000472045 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
IRF1-208ENST00000472045 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
IRF1-208ENST00000472045 PRM1P04553 51 aa3.38□□□□□ -1.87
IRF1-208ENST00000472045 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
IRF1-208ENST00000472045 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
IRF1-208ENST00000472045 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
IRF1-208ENST00000472045 NEBP20929 6669 aa3.27□□□□□ -1.89
IRF1-208ENST00000472045 MDN1Q9NU22 5596 aa3.16□□□□□ -1.9
IRF1-208ENST00000472045 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
IRF1-208ENST00000472045 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
IRF1-208ENST00000472045 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
IRF1-208ENST00000472045 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
IRF1-208ENST00000472045 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.92
IRF1-208ENST00000472045 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
IRF1-208ENST00000472045 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
IRF1-208ENST00000472045 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
IRF1-208ENST00000472045 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
IRF1-208ENST00000472045 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
IRF1-208ENST00000472045 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
IRF1-208ENST00000472045 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
IRF1-208ENST00000472045 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
IRF1-208ENST00000472045 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
IRF1-208ENST00000472045 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
IRF1-208ENST00000472045 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
IRF1-208ENST00000472045 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
IRF1-208ENST00000472045 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
IRF1-208ENST00000472045 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
IRF1-208ENST00000472045 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
IRF1-208ENST00000472045 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
IRF1-208ENST00000472045 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
IRF1-208ENST00000472045 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
IRF1-208ENST00000472045 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
IRF1-208ENST00000472045 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
IRF1-208ENST00000472045 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
IRF1-208ENST00000472045 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
IRF1-208ENST00000472045 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
IRF1-208ENST00000472045 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.13
IRF1-208ENST00000472045 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
IRF1-208ENST00000472045 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms