RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 CSMD2Q7Z408 3487 aa0.25□□□□□ -2.37
PRPF40A-206ENST00000471167 SSPOA2VEC9 5147 aa0.25□□□□□ -2.37
PRPF40A-206ENST00000471167 MUC17Q685J3 4493 aa0.25□□□□□ -2.37
PRPF40A-206ENST00000471167 TLN1Q9Y490 2541 aaKnown RBP0.24□□□□□ -2.37
PRPF40A-206ENST00000471167 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
PRPF40A-206ENST00000471167 MT1XP80297 61 aa0.23□□□□□ -2.37
PRPF40A-206ENST00000471167 SRCAPQ6ZRS2 3230 aa0.23□□□□□ -2.37
PRPF40A-206ENST00000471167 MKI67P46013 3256 aaKnown RBP0.21□□□□□ -2.38
PRPF40A-206ENST00000471167 FREM2Q5SZK8 3169 aa0.21□□□□□ -2.38
PRPF40A-206ENST00000471167 VPS13CQ709C8 3753 aa0.2□□□□□ -2.38
PRPF40A-206ENST00000471167 PCLOQ9Y6V0 5065 aa0.2□□□□□ -2.38
PRPF40A-206ENST00000471167 CEP295Q9C0D2 2601 aa0.19□□□□□ -2.38
PRPF40A-206ENST00000471167 KRTAP19-7Q3SYF9 63 aa0.19□□□□□ -2.38
PRPF40A-206ENST00000471167 DCHS1Q96JQ0 3298 aa0.18□□□□□ -2.38
PRPF40A-206ENST00000471167 XIRP2A4UGR9 3374 aa0.18□□□□□ -2.38
PRPF40A-206ENST00000471167 COX14Q96I36 57 aa0.18□□□□□ -2.38
PRPF40A-206ENST00000471167 KMT2CQ8NEZ4 4911 aaKnown RBP0.18□□□□□ -2.38
PRPF40A-206ENST00000471167 MUC3AQ02505 3323 aa0.17□□□□□ -2.38
PRPF40A-206ENST00000471167 MYO9AB2RTY4 2548 aa0.17□□□□□ -2.38
PRPF40A-206ENST00000471167 USH2AO75445 5202 aa0.16□□□□□ -2.38
PRPF40A-206ENST00000471167 LAMA2P24043 3122 aaKnown RBP0.16□□□□□ -2.38
PRPF40A-206ENST00000471167 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
PRPF40A-206ENST00000471167 KRTAP19-8Q3LI54 63 aa0.15□□□□□ -2.39
PRPF40A-206ENST00000471167 MACF1Q9UPN3 7388 aaKnown RBP0.15□□□□□ -2.39
PRPF40A-206ENST00000471167 WDFY4Q6ZS81 3184 aa0.14□□□□□ -2.39
PRPF40A-206ENST00000471167 BOD1L1Q8NFC6 3051 aa0.14□□□□□ -2.39
PRPF40A-206ENST00000471167 MUC2Q02817 5179 aa0.13□□□□□ -2.39
PRPF40A-206ENST00000471167 STARD9Q9P2P6 4700 aa0.12□□□□□ -2.39
PRPF40A-206ENST00000471167 HTN3P15516 51 aa0.12□□□□□ -2.39
PRPF40A-206ENST00000471167 CENPEQ02224 2701 aa0.12□□□□□ -2.39
PRPF40A-206ENST00000471167 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
PRPF40A-206ENST00000471167 MYO15AQ9UKN7 3530 aa0.11□□□□□ -2.39
PRPF40A-206ENST00000471167 MT1GP13640 62 aa0.11□□□□□ -2.39
PRPF40A-206ENST00000471167 EYSQ5T1H1 3165 aa0.09□□□□□ -2.39
PRPF40A-206ENST00000471167 UBR4Q5T4S7 5183 aa0.08□□□□□ -2.4
PRPF40A-206ENST00000471167 RYR1P21817 5038 aa0.07□□□□□ -2.4
PRPF40A-206ENST00000471167 KRTAP6-1Q3LI64 71 aa0.07□□□□□ -2.4
PRPF40A-206ENST00000471167 DNHD1Q96M86 4753 aa0.06□□□□□ -2.4
PRPF40A-206ENST00000471167 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
PRPF40A-206ENST00000471167 LOC400499M0QZD8 3231 aa0.05□□□□□ -2.4
PRPF40A-206ENST00000471167 PCNTO95613 3336 aa0.04□□□□□ -2.4
PRPF40A-206ENST00000471167 CEP350Q5VT06 3117 aa0.04□□□□□ -2.4
PRPF40A-206ENST00000471167 MT2AP02795 61 aa0.01□□□□□ -2.41
PRPF40A-206ENST00000471167 DSTQ03001 7570 aaKnown RBP0□□□□□ -2.41
PRPF40A-206ENST00000471167 MT1MQ8N339 61 aa0□□□□□ -2.41
PRPF40A-206ENST00000471167 BIRC6Q9NR09 4857 aa-0.01□□□□□ -2.41
PRPF40A-206ENST00000471167 EPPK1P58107 5090 aaKnown RBP-0.02□□□□□ -2.41
PRPF40A-206ENST00000471167 HERC2O95714 4834 aa-0.02□□□□□ -2.41
PRPF40A-206ENST00000471167 CFAP47Q6ZTR5 3102 aa-0.03□□□□□ -2.41
PRPF40A-206ENST00000471167 MT1HL1P0DM35 61 aa-0.03□□□□□ -2.41
PRPF40A-206ENST00000471167 RYR2Q92736 4967 aa-0.03□□□□□ -2.41
PRPF40A-206ENST00000471167 HYDINQ4G0P3 5121 aa-0.04□□□□□ -2.42
PRPF40A-206ENST00000471167 RNF213Q63HN8 5207 aa-0.05□□□□□ -2.42
PRPF40A-206ENST00000471167 ASPMQ8IZT6 3477 aa-0.05□□□□□ -2.42
PRPF40A-206ENST00000471167 USP34Q70CQ2 3546 aa-0.05□□□□□ -2.42
PRPF40A-206ENST00000471167 RYR3Q15413 4870 aa-0.07□□□□□ -2.42
PRPF40A-206ENST00000471167 KIAA1109Q2LD37 5005 aa-0.07□□□□□ -2.42
PRPF40A-206ENST00000471167 NEBP20929 6669 aa-0.08□□□□□ -2.42
PRPF40A-206ENST00000471167 MT4P47944 62 aa-0.08□□□□□ -2.42
PRPF40A-206ENST00000471167 KRTAP20-2Q3LI61 65 aa-0.08□□□□□ -2.42
PRPF40A-206ENST00000471167 SPEGQ15772 3267 aa-0.1□□□□□ -2.43
PRPF40A-206ENST00000471167 UNC80Q8N2C7 3258 aa-0.15□□□□□ -2.43
PRPF40A-206ENST00000471167 WDFY3Q8IZQ1 3526 aa-0.15□□□□□ -2.43
PRPF40A-206ENST00000471167 UTRNP46939 3433 aa-0.16□□□□□ -2.43
PRPF40A-206ENST00000471167 EP400Q96L91 3159 aa-0.16□□□□□ -2.43
PRPF40A-206ENST00000471167 VCANP13611 3396 aa-0.16□□□□□ -2.43
PRPF40A-206ENST00000471167 MT1BP07438 61 aa-0.16□□□□□ -2.44
PRPF40A-206ENST00000471167 ABCA13Q86UQ4 5058 aa-0.16□□□□□ -2.44
PRPF40A-206ENST00000471167 GOLGB1Q14789 3259 aaKnown RBP-0.19□□□□□ -2.44
PRPF40A-206ENST00000471167 BRCA2P51587 3418 aa-0.19□□□□□ -2.44
PRPF40A-206ENST00000471167 VPS13AQ96RL7 3174 aa-0.21□□□□□ -2.44
PRPF40A-206ENST00000471167 MT1FP04733 61 aa-0.24□□□□□ -2.45
PRPF40A-206ENST00000471167 KRTAP19-2Q3LHN2 52 aa-0.25□□□□□ -2.45
PRPF40A-206ENST00000471167 CENPFP49454 3210 aa-0.26□□□□□ -2.45
PRPF40A-206ENST00000471167 DNAH14Q0VDD8 3507 aa-0.31□□□□□ -2.46
PRPF40A-206ENST00000471167 CDH23Q9H251 3354 aa-0.37□□□□□ -2.47
PRPF40A-206ENST00000471167 KRTAP20-1Q3LI63 56 aa-0.38□□□□□ -2.47
PRPF40A-206ENST00000471167 KRTAP19-6Q3LI70 58 aa-0.45□□□□□ -2.48
Retrieved 78 of 20,778 RNA–protein pairs in 101.6 ms