RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
XRN1-208ENST00000470537 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
XRN1-208ENST00000470537 ACYP2P14621 99 aa3.23□□□□□ -1.89
XRN1-208ENST00000470537 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
XRN1-208ENST00000470537 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
XRN1-208ENST00000470537 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
XRN1-208ENST00000470537 LINC00643Q86TS7 51 aa3.19□□□□□ -1.9
XRN1-208ENST00000470537 A0A1B0GV90 55 aa3.17□□□□□ -1.9
XRN1-208ENST00000470537 CHKB-CPT1BH3BT56 60 aa3.17□□□□□ -1.9
XRN1-208ENST00000470537 V9GYY9 64 aa3.17□□□□□ -1.9
XRN1-208ENST00000470537 A0A0D9SG42 100 aa3.16□□□□□ -1.9
XRN1-208ENST00000470537 SCGB1A1P11684 91 aa3.15□□□□□ -1.91
XRN1-208ENST00000470537 MT1MQ8N339 61 aa3.14□□□□□ -1.91
XRN1-208ENST00000470537 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
XRN1-208ENST00000470537 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
XRN1-208ENST00000470537 SMIM26A0A096LP01 95 aa3.08□□□□□ -1.92
XRN1-208ENST00000470537 MT1LQ93083 61 aa3.08□□□□□ -1.92
XRN1-208ENST00000470537 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
XRN1-208ENST00000470537 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
XRN1-208ENST00000470537 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
XRN1-208ENST00000470537 A8MU10 97 aa3.05□□□□□ -1.92
XRN1-208ENST00000470537 K7ERU9 68 aa3.05□□□□□ -1.92
XRN1-208ENST00000470537 SPINT4Q6UDR6 99 aa3.03□□□□□ -1.92
XRN1-208ENST00000470537 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
XRN1-208ENST00000470537 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
XRN1-208ENST00000470537 KRTAP12-4P60329 112 aa3□□□□□ -1.93
XRN1-208ENST00000470537 SMIM20Q8N5G0 67 aa3□□□□□ -1.93
XRN1-208ENST00000470537 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
XRN1-208ENST00000470537 PSPHP1O15172 72 aa2.97□□□□□ -1.93
XRN1-208ENST00000470537 J3QR89 54 aa2.96□□□□□ -1.94
XRN1-208ENST00000470537 TNP1P09430 55 aa2.95□□□□□ -1.94
XRN1-208ENST00000470537 SPANXA2-OT1Q8N9U9 137 aa2.94□□□□□ -1.94
XRN1-208ENST00000470537 A0A1B0GU33 70 aa2.93□□□□□ -1.94
XRN1-208ENST00000470537 SPATA8Q6RVD6 105 aa2.93□□□□□ -1.94
XRN1-208ENST00000470537 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
XRN1-208ENST00000470537 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
XRN1-208ENST00000470537 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
XRN1-208ENST00000470537 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
XRN1-208ENST00000470537 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
XRN1-208ENST00000470537 ANAPC13Q9BS18 74 aa2.85□□□□□ -1.95
XRN1-208ENST00000470537 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
XRN1-208ENST00000470537 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
XRN1-208ENST00000470537 COA5Q86WW8 74 aa2.83□□□□□ -1.96
XRN1-208ENST00000470537 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
XRN1-208ENST00000470537 SERP2Q8N6R1 65 aa2.79□□□□□ -1.96
XRN1-208ENST00000470537 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
XRN1-208ENST00000470537 A0A1B0GU69 56 aa2.76□□□□□ -1.97
XRN1-208ENST00000470537 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
XRN1-208ENST00000470537 CCDC179H3BU77 68 aa2.73□□□□□ -1.97
XRN1-208ENST00000470537 TMEM258P61165 79 aa2.7□□□□□ -1.98
XRN1-208ENST00000470537 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
XRN1-208ENST00000470537 K7ERS5 55 aa2.66□□□□□ -1.98
XRN1-208ENST00000470537 COX7CP15954 63 aa2.66□□□□□ -1.98
XRN1-208ENST00000470537 PMAIP1Q13794 54 aa2.66□□□□□ -1.98
XRN1-208ENST00000470537 MT1AP04731 61 aa2.64□□□□□ -1.99
XRN1-208ENST00000470537 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
XRN1-208ENST00000470537 PRR15LQ9BU68 103 aa2.64□□□□□ -1.99
XRN1-208ENST00000470537 A6NED7 52 aa2.6□□□□□ -1.99
XRN1-208ENST00000470537 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
XRN1-208ENST00000470537 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
XRN1-208ENST00000470537 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
XRN1-208ENST00000470537 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
XRN1-208ENST00000470537 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
XRN1-208ENST00000470537 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
XRN1-208ENST00000470537 H7BZZ5 65 aa2.56□□□□□ -2
XRN1-208ENST00000470537 KTN1-AS1Q86SY8 53 aa2.54□□□□□ -2
XRN1-208ENST00000470537 UQCR11O14957 56 aa2.52□□□□□ -2.01
XRN1-208ENST00000470537 LINC01558Q9Y6Z2 57 aa2.46□□□□□ -2.02
XRN1-208ENST00000470537 Q1T7F1 81 aa2.44□□□□□ -2.02
XRN1-208ENST00000470537 MIR22HGQ0VDD5 57 aa2.4□□□□□ -2.03
XRN1-208ENST00000470537 CDC42SE1Q9NRR8 79 aa2.34□□□□□ -2.03
XRN1-208ENST00000470537 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
XRN1-208ENST00000470537 ROMO1P60602 79 aa2.2□□□□□ -2.06
XRN1-208ENST00000470537 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
XRN1-208ENST00000470537 INE1O15225 51 aa1.79□□□□□ -2.12
XRN1-208ENST00000470537 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
XRN1-208ENST00000470537 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
XRN1-208ENST00000470537 PRM1P04553 51 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms