RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
SFXN3-205ENST00000470252 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
SFXN3-205ENST00000470252 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
SFXN3-205ENST00000470252 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
SFXN3-205ENST00000470252 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
SFXN3-205ENST00000470252 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
SFXN3-205ENST00000470252 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
SFXN3-205ENST00000470252 MT1LQ93083 61 aa4.5□□□□□ -1.69
SFXN3-205ENST00000470252 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
SFXN3-205ENST00000470252 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
SFXN3-205ENST00000470252 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
SFXN3-205ENST00000470252 MT1EP04732 61 aa4.47□□□□□ -1.69
SFXN3-205ENST00000470252 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.69
SFXN3-205ENST00000470252 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
SFXN3-205ENST00000470252 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
SFXN3-205ENST00000470252 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
SFXN3-205ENST00000470252 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
SFXN3-205ENST00000470252 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SFXN3-205ENST00000470252 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
SFXN3-205ENST00000470252 MT1GP13640 62 aa4.24□□□□□ -1.73
SFXN3-205ENST00000470252 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
SFXN3-205ENST00000470252 NEBP20929 6669 aa4.21□□□□□ -1.74
SFXN3-205ENST00000470252 MT1MQ8N339 61 aa4.17□□□□□ -1.74
SFXN3-205ENST00000470252 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
SFXN3-205ENST00000470252 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
SFXN3-205ENST00000470252 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
SFXN3-205ENST00000470252 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
SFXN3-205ENST00000470252 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
SFXN3-205ENST00000470252 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
SFXN3-205ENST00000470252 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
SFXN3-205ENST00000470252 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
SFXN3-205ENST00000470252 SPRR2EP22531 72 aa4□□□□□ -1.77
SFXN3-205ENST00000470252 SPRR2BP35325 72 aa4□□□□□ -1.77
SFXN3-205ENST00000470252 SPRR2AP35326 72 aa4□□□□□ -1.77
SFXN3-205ENST00000470252 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
SFXN3-205ENST00000470252 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
SFXN3-205ENST00000470252 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
SFXN3-205ENST00000470252 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
SFXN3-205ENST00000470252 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
SFXN3-205ENST00000470252 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
SFXN3-205ENST00000470252 SPRR2DP22532 72 aa3.86□□□□□ -1.79
SFXN3-205ENST00000470252 MT1AP04731 61 aa3.84□□□□□ -1.8
SFXN3-205ENST00000470252 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
SFXN3-205ENST00000470252 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
SFXN3-205ENST00000470252 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
SFXN3-205ENST00000470252 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SFXN3-205ENST00000470252 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
SFXN3-205ENST00000470252 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SFXN3-205ENST00000470252 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
SFXN3-205ENST00000470252 PRM1P04553 51 aa3.66□□□□□ -1.82
SFXN3-205ENST00000470252 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
SFXN3-205ENST00000470252 MT4P47944 62 aa3.39□□□□□ -1.87
SFXN3-205ENST00000470252 MT3P25713 68 aa3.37□□□□□ -1.87
SFXN3-205ENST00000470252 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
SFXN3-205ENST00000470252 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
SFXN3-205ENST00000470252 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
SFXN3-205ENST00000470252 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
SFXN3-205ENST00000470252 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
SFXN3-205ENST00000470252 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
SFXN3-205ENST00000470252 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
SFXN3-205ENST00000470252 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
SFXN3-205ENST00000470252 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
SFXN3-205ENST00000470252 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
SFXN3-205ENST00000470252 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SFXN3-205ENST00000470252 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SFXN3-205ENST00000470252 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
SFXN3-205ENST00000470252 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
SFXN3-205ENST00000470252 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
SFXN3-205ENST00000470252 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
SFXN3-205ENST00000470252 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
SFXN3-205ENST00000470252 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
SFXN3-205ENST00000470252 LCE1CQ5T751 118 aa2.55□□□□□ -2
SFXN3-205ENST00000470252 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
SFXN3-205ENST00000470252 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
SFXN3-205ENST00000470252 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SFXN3-205ENST00000470252 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SFXN3-205ENST00000470252 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
SFXN3-205ENST00000470252 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 36.9 ms