RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 KRTAP9-6A8MVA2 160 aa6.99□□□□□ -1.29
CDHR3-207ENST00000470188 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
CDHR3-207ENST00000470188 KRTAP2-3P0C7H8 128 aa6.95□□□□□ -1.3
CDHR3-207ENST00000470188 KRTAP2-4Q9BYR9 128 aa6.95□□□□□ -1.3
CDHR3-207ENST00000470188 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
CDHR3-207ENST00000470188 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
CDHR3-207ENST00000470188 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
CDHR3-207ENST00000470188 SYNE2Q8WXH0 6885 aaKnown RBP6.68□□□□□ -1.34
CDHR3-207ENST00000470188 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
CDHR3-207ENST00000470188 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
CDHR3-207ENST00000470188 MT1GP13640 62 aa6.6□□□□□ -1.35
CDHR3-207ENST00000470188 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
CDHR3-207ENST00000470188 MT1MQ8N339 61 aa6.59□□□□□ -1.35
CDHR3-207ENST00000470188 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
CDHR3-207ENST00000470188 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
CDHR3-207ENST00000470188 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
CDHR3-207ENST00000470188 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
CDHR3-207ENST00000470188 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
CDHR3-207ENST00000470188 MDN1Q9NU22 5596 aa6.34□□□□□ -1.39
CDHR3-207ENST00000470188 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.4
CDHR3-207ENST00000470188 LCE1AQ5T7P2 110 aa6.24□□□□□ -1.41
CDHR3-207ENST00000470188 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
CDHR3-207ENST00000470188 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
CDHR3-207ENST00000470188 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
CDHR3-207ENST00000470188 SPRR2EP22531 72 aa6.17□□□□□ -1.42
CDHR3-207ENST00000470188 SPRR2BP35325 72 aa6.17□□□□□ -1.42
CDHR3-207ENST00000470188 SPRR2AP35326 72 aa6.17□□□□□ -1.42
CDHR3-207ENST00000470188 NEBP20929 6669 aa5.98□□□□□ -1.45
CDHR3-207ENST00000470188 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
CDHR3-207ENST00000470188 SPRR2DP22532 72 aa5.94□□□□□ -1.46
CDHR3-207ENST00000470188 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
CDHR3-207ENST00000470188 MT1AP04731 61 aa5.91□□□□□ -1.46
CDHR3-207ENST00000470188 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
CDHR3-207ENST00000470188 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
CDHR3-207ENST00000470188 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
CDHR3-207ENST00000470188 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
CDHR3-207ENST00000470188 LCE3EQ5T5B0 92 aa5.63□□□□□ -1.51
CDHR3-207ENST00000470188 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
CDHR3-207ENST00000470188 PRM1P04553 51 aa5.5□□□□□ -1.53
CDHR3-207ENST00000470188 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.53
CDHR3-207ENST00000470188 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
CDHR3-207ENST00000470188 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
CDHR3-207ENST00000470188 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
CDHR3-207ENST00000470188 MT3P25713 68 aa5.32□□□□□ -1.56
CDHR3-207ENST00000470188 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
CDHR3-207ENST00000470188 MT4P47944 62 aa5.19□□□□□ -1.58
CDHR3-207ENST00000470188 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
CDHR3-207ENST00000470188 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
CDHR3-207ENST00000470188 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
CDHR3-207ENST00000470188 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
CDHR3-207ENST00000470188 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
CDHR3-207ENST00000470188 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
CDHR3-207ENST00000470188 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
CDHR3-207ENST00000470188 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
CDHR3-207ENST00000470188 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
CDHR3-207ENST00000470188 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
CDHR3-207ENST00000470188 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
CDHR3-207ENST00000470188 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
CDHR3-207ENST00000470188 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
CDHR3-207ENST00000470188 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
CDHR3-207ENST00000470188 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
CDHR3-207ENST00000470188 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
CDHR3-207ENST00000470188 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
CDHR3-207ENST00000470188 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
CDHR3-207ENST00000470188 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
CDHR3-207ENST00000470188 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
CDHR3-207ENST00000470188 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
CDHR3-207ENST00000470188 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
CDHR3-207ENST00000470188 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
CDHR3-207ENST00000470188 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
CDHR3-207ENST00000470188 KRTAP21-1Q3LI58 79 aa3.55□□□□□ -1.84
CDHR3-207ENST00000470188 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
CDHR3-207ENST00000470188 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
CDHR3-207ENST00000470188 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
CDHR3-207ENST00000470188 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
CDHR3-207ENST00000470188 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
CDHR3-207ENST00000470188 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
CDHR3-207ENST00000470188 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms