RNA–Protein interactions for RNA: ENST00000470019.5

PTK7-208, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 5

Gene PTK7, Length 4,016 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-208	ENST00000470019	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.05	□□□□□ -1.6
PTK7-208	ENST00000470019	KRTAP19-7	Q3SYF9	63 aa		5.05	□□□□□ -1.6
PTK7-208	ENST00000470019	SSPO	A2VEC9	5147 aa		5.01	□□□□□ -1.61
PTK7-208	ENST00000470019	KRTAP4-3	Q9BYR4	195 aa		4.99	□□□□□ -1.61
PTK7-208	ENST00000470019	MUC12	Q9UKN1	5478 aa		4.95	□□□□□ -1.62
PTK7-208	ENST00000470019	KRTAP9-2	Q9BYQ4	174 aa		4.93	□□□□□ -1.62
PTK7-208	ENST00000470019	KRTAP19-3	Q7Z4W3	81 aa		4.92	□□□□□ -1.62
PTK7-208	ENST00000470019	LOC100996750	A0A140TA64	210 aa		4.91	□□□□□ -1.62
PTK7-208	ENST00000470019	SPRR2E	P22531	72 aa		4.9	□□□□□ -1.63
PTK7-208	ENST00000470019	SPRR2B	P35325	72 aa		4.9	□□□□□ -1.63
PTK7-208	ENST00000470019	SPRR2A	P35326	72 aa		4.9	□□□□□ -1.63
PTK7-208	ENST00000470019	KRTAP19-4	Q3LI73	84 aa		4.87	□□□□□ -1.63
PTK7-208	ENST00000470019	SYNE2	Q8WXH0	6885 aa	Known RBP	4.86	□□□□□ -1.63
PTK7-208	ENST00000470019	LCE3B	Q5TA77	95 aa		4.83	□□□□□ -1.64
PTK7-208	ENST00000470019	LCE2D	Q5TA82	110 aa	Predicted RBP	4.82	□□□□□ -1.64
PTK7-208	ENST00000470019	MT1M	Q8N339	61 aa		4.82	□□□□□ -1.64
PTK7-208	ENST00000470019	KRTAP9-6	A8MVA2	160 aa		4.81	□□□□□ -1.64
PTK7-208	ENST00000470019	MACF1	Q9UPN3	7388 aa	Known RBP	4.8	□□□□□ -1.64
PTK7-208	ENST00000470019	SPRR2D	P22532	72 aa		4.69	□□□□□ -1.66
PTK7-208	ENST00000470019	KRTAP12-4	P60329	112 aa		4.6	□□□□□ -1.67
PTK7-208	ENST00000470019	LCE5A	Q5TCM9	118 aa		4.5	□□□□□ -1.69
PTK7-208	ENST00000470019	KRTAP2-3	P0C7H8	128 aa		4.47	□□□□□ -1.69
PTK7-208	ENST00000470019	KRTAP2-4	Q9BYR9	128 aa		4.47	□□□□□ -1.69
PTK7-208	ENST00000470019	KRTAP2-1	Q9BYU5	128 aa		4.47	□□□□□ -1.69
PTK7-208	ENST00000470019	KRTAP4-9	Q9BYQ8	210 aa		4.46	□□□□□ -1.7
PTK7-208	ENST00000470019	MDN1	Q9NU22	5596 aa		4.44	□□□□□ -1.7
PTK7-208	ENST00000470019	LCE1A	Q5T7P2	110 aa		4.43	□□□□□ -1.7
PTK7-208	ENST00000470019	KRTAP9-6	A0A140TA67	174 aa		4.42	□□□□□ -1.7
PTK7-208	ENST00000470019	LCE3D	Q9BYE3	92 aa		4.39	□□□□□ -1.71
PTK7-208	ENST00000470019	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.33	□□□□□ -1.72
PTK7-208	ENST00000470019	KRTAP6-1	Q3LI64	71 aa		4.33	□□□□□ -1.72
PTK7-208	ENST00000470019	MT1A	P04731	61 aa		4.29	□□□□□ -1.72
PTK7-208	ENST00000470019	MT4	P47944	62 aa		4.29	□□□□□ -1.72
PTK7-208	ENST00000470019	LCE3E	Q5T5B0	92 aa		4.28	□□□□□ -1.72
PTK7-208	ENST00000470019	KRTAP6-3	Q3LI67	103 aa		4.21	□□□□□ -1.73
PTK7-208	ENST00000470019	KRTAP9-7	A8MTY7	169 aa		4.2	□□□□□ -1.74
PTK7-208	ENST00000470019	MT3	P25713	68 aa		4.15	□□□□□ -1.75
PTK7-208	ENST00000470019	KRTAP5-9	P26371	169 aa		4.13	□□□□□ -1.75
PTK7-208	ENST00000470019	KRTAP6-2	Q3LI66	62 aa		4.08	□□□□□ -1.76
PTK7-208	ENST00000470019	PRM1	P04553	51 aa		4.01	□□□□□ -1.77
PTK7-208	ENST00000470019	KRTAP9-4	Q9BYQ2	154 aa		4.01	□□□□□ -1.77
PTK7-208	ENST00000470019	LCE1D	Q5T752	114 aa		3.89	□□□□□ -1.79
PTK7-208	ENST00000470019	NEB	P20929	6669 aa		3.86	□□□□□ -1.79
PTK7-208	ENST00000470019	LCE1B	Q5T7P3	118 aa		3.83	□□□□□ -1.8
PTK7-208	ENST00000470019	KRTAP20-1	Q3LI63	56 aa		3.82	□□□□□ -1.8
PTK7-208	ENST00000470019	KRTAP4-6	Q9BYQ5	205 aa		3.81	□□□□□ -1.8
PTK7-208	ENST00000470019	KRTAP2-2	Q9BYT5	123 aa		3.78	□□□□□ -1.8
PTK7-208	ENST00000470019	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.72	□□□□□ -1.81
PTK7-208	ENST00000470019	LCE4A	Q5TA78	99 aa		3.72	□□□□□ -1.81
PTK7-208	ENST00000470019	KRTAP20-2	Q3LI61	65 aa		3.59	□□□□□ -1.84
PTK7-208	ENST00000470019	HMCN1	Q96RW7	5635 aa		3.44	□□□□□ -1.86
PTK7-208	ENST00000470019	MUC19	Q7Z5P9	8384 aa		3.42	□□□□□ -1.86
PTK7-208	ENST00000470019	KRTAP5-4	Q6L8H1	288 aa		3.39	□□□□□ -1.87
PTK7-208	ENST00000470019	MUC5AC	P98088	5654 aa		3.39	□□□□□ -1.87
PTK7-208	ENST00000470019	GPR98	Q8WXG9	6306 aa		3.17	□□□□□ -1.9
PTK7-208	ENST00000470019	KRTAP4-11	Q9BYQ6	195 aa		3.14	□□□□□ -1.91
PTK7-208	ENST00000470019	KRTAP5-3	Q6L8H2	238 aa		3.07	□□□□□ -1.92
PTK7-208	ENST00000470019	KRTAP5-2	Q701N4	177 aa		3.07	□□□□□ -1.92
PTK7-208	ENST00000470019	LCE1E	Q5T753	118 aa		3.01	□□□□□ -1.93
PTK7-208	ENST00000470019	KRTAP4-4	Q9BYR3	166 aa		2.99	□□□□□ -1.93
PTK7-208	ENST00000470019	KRTAP9-9	Q9BYP9	154 aa		2.97	□□□□□ -1.93
PTK7-208	ENST00000470019	AHNAK2	Q8IVF2	5795 aa		2.96	□□□□□ -1.94
PTK7-208	ENST00000470019	KRTAP4-12	Q9BQ66	201 aa		2.96	□□□□□ -1.94
PTK7-208	ENST00000470019	KRTAP4-2	Q9BYR5	136 aa		2.96	□□□□□ -1.94
PTK7-208	ENST00000470019	LCE1F	Q5T754	118 aa		2.95	□□□□□ -1.94
PTK7-208	ENST00000470019	LCE1C	Q5T751	118 aa		2.93	□□□□□ -1.94
PTK7-208	ENST00000470019	KRTAP5-8	O75690	187 aa		2.8	□□□□□ -1.96
PTK7-208	ENST00000470019	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.77	□□□□□ -1.97
PTK7-208	ENST00000470019	KRTAP5-7	Q6L8G8	165 aa		2.75	□□□□□ -1.97
PTK7-208	ENST00000470019	KRTAP5-10	Q6L8G5	202 aa		2.75	□□□□□ -1.97
PTK7-208	ENST00000470019	KRTAP5-1	Q6L8H4	278 aa		2.74	□□□□□ -1.97
PTK7-208	ENST00000470019	KRTAP21-2	Q3LI59	83 aa		2.53	□□□□□ -2
PTK7-208	ENST00000470019	AHNAK	Q09666	5890 aa	Known RBP	2.49	□□□□□ -2.01
PTK7-208	ENST00000470019	KRTAP5-11	Q6L8G4	156 aa		2.41	□□□□□ -2.02
PTK7-208	ENST00000470019	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.35	□□□□□ -2.03
PTK7-208	ENST00000470019	PHGR1	C9JFL3	82 aa		2.08	□□□□□ -2.08
PTK7-208	ENST00000470019	KRTAP21-1	Q3LI58	79 aa		1.99	□□□□□ -2.09
PTK7-208	ENST00000470019	MUC16	Q8WXI7	14507 aa		1.36	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms