RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
SNU13-207ENST00000469522 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SNU13-207ENST00000469522 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
SNU13-207ENST00000469522 MT1LQ93083 61 aa4.18□□□□□ -1.74
SNU13-207ENST00000469522 UQCR11O14957 56 aa4.17□□□□□ -1.74
SNU13-207ENST00000469522 MT1MQ8N339 61 aa4.17□□□□□ -1.74
SNU13-207ENST00000469522 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
SNU13-207ENST00000469522 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.75
SNU13-207ENST00000469522 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
SNU13-207ENST00000469522 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
SNU13-207ENST00000469522 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
SNU13-207ENST00000469522 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
SNU13-207ENST00000469522 K7ERS5 55 aa4.04□□□□□ -1.76
SNU13-207ENST00000469522 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
SNU13-207ENST00000469522 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
SNU13-207ENST00000469522 V9GYY9 64 aa4.03□□□□□ -1.76
SNU13-207ENST00000469522 MT4P47944 62 aa4.02□□□□□ -1.77
SNU13-207ENST00000469522 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SNU13-207ENST00000469522 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
SNU13-207ENST00000469522 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
SNU13-207ENST00000469522 PSPHP1O15172 72 aa3.99□□□□□ -1.77
SNU13-207ENST00000469522 Q1T7F1 81 aa3.98□□□□□ -1.77
SNU13-207ENST00000469522 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
SNU13-207ENST00000469522 A6NED7 52 aa3.87□□□□□ -1.79
SNU13-207ENST00000469522 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
SNU13-207ENST00000469522 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
SNU13-207ENST00000469522 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
SNU13-207ENST00000469522 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
SNU13-207ENST00000469522 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
SNU13-207ENST00000469522 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
SNU13-207ENST00000469522 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
SNU13-207ENST00000469522 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
SNU13-207ENST00000469522 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
SNU13-207ENST00000469522 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
SNU13-207ENST00000469522 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
SNU13-207ENST00000469522 ROMO1P60602 79 aa3.71□□□□□ -1.82
SNU13-207ENST00000469522 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
SNU13-207ENST00000469522 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
SNU13-207ENST00000469522 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
SNU13-207ENST00000469522 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
SNU13-207ENST00000469522 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
SNU13-207ENST00000469522 PRAC1Q96KF2 57 aa3.56□□□□□ -1.84
SNU13-207ENST00000469522 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
SNU13-207ENST00000469522 MT1AP04731 61 aa3.54□□□□□ -1.84
SNU13-207ENST00000469522 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
SNU13-207ENST00000469522 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
SNU13-207ENST00000469522 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
SNU13-207ENST00000469522 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
SNU13-207ENST00000469522 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
SNU13-207ENST00000469522 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
SNU13-207ENST00000469522 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
SNU13-207ENST00000469522 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
SNU13-207ENST00000469522 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
SNU13-207ENST00000469522 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
SNU13-207ENST00000469522 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
SNU13-207ENST00000469522 MT3P25713 68 aa3.26□□□□□ -1.89
SNU13-207ENST00000469522 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
SNU13-207ENST00000469522 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
SNU13-207ENST00000469522 LCE1EQ5T753 118 aa3□□□□□ -1.93
SNU13-207ENST00000469522 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
SNU13-207ENST00000469522 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
SNU13-207ENST00000469522 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SNU13-207ENST00000469522 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
SNU13-207ENST00000469522 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
SNU13-207ENST00000469522 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
SNU13-207ENST00000469522 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SNU13-207ENST00000469522 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
SNU13-207ENST00000469522 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
SNU13-207ENST00000469522 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
SNU13-207ENST00000469522 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
SNU13-207ENST00000469522 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
SNU13-207ENST00000469522 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SNU13-207ENST00000469522 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
SNU13-207ENST00000469522 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
SNU13-207ENST00000469522 PRM1P04553 51 aa1.88□□□□□ -2.11
SNU13-207ENST00000469522 INE1O15225 51 aa1.78□□□□□ -2.12
SNU13-207ENST00000469522 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SNU13-207ENST00000469522 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 161 ms