RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
CBX6-203ENST00000469420 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
CBX6-203ENST00000469420 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
CBX6-203ENST00000469420 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
CBX6-203ENST00000469420 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
CBX6-203ENST00000469420 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
CBX6-203ENST00000469420 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
CBX6-203ENST00000469420 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
CBX6-203ENST00000469420 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
CBX6-203ENST00000469420 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.52
CBX6-203ENST00000469420 SYNE2Q8WXH0 6885 aaKnown RBP5.58□□□□□ -1.52
CBX6-203ENST00000469420 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
CBX6-203ENST00000469420 MT1MQ8N339 61 aa5.55□□□□□ -1.52
CBX6-203ENST00000469420 MT1GP13640 62 aa5.53□□□□□ -1.52
CBX6-203ENST00000469420 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
CBX6-203ENST00000469420 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
CBX6-203ENST00000469420 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
CBX6-203ENST00000469420 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.55
CBX6-203ENST00000469420 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
CBX6-203ENST00000469420 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
CBX6-203ENST00000469420 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
CBX6-203ENST00000469420 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
CBX6-203ENST00000469420 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
CBX6-203ENST00000469420 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
CBX6-203ENST00000469420 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
CBX6-203ENST00000469420 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
CBX6-203ENST00000469420 SPRR2EP22531 72 aa5.03□□□□□ -1.6
CBX6-203ENST00000469420 SPRR2BP35325 72 aa5.03□□□□□ -1.6
CBX6-203ENST00000469420 SPRR2AP35326 72 aa5.03□□□□□ -1.6
CBX6-203ENST00000469420 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
CBX6-203ENST00000469420 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.61
CBX6-203ENST00000469420 MT1AP04731 61 aa4.96□□□□□ -1.62
CBX6-203ENST00000469420 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
CBX6-203ENST00000469420 NEBP20929 6669 aa4.94□□□□□ -1.62
CBX6-203ENST00000469420 SPRR2DP22532 72 aa4.82□□□□□ -1.64
CBX6-203ENST00000469420 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
CBX6-203ENST00000469420 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
CBX6-203ENST00000469420 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
CBX6-203ENST00000469420 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
CBX6-203ENST00000469420 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
CBX6-203ENST00000469420 PRM1P04553 51 aa4.48□□□□□ -1.69
CBX6-203ENST00000469420 MT3P25713 68 aa4.44□□□□□ -1.7
CBX6-203ENST00000469420 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
CBX6-203ENST00000469420 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
CBX6-203ENST00000469420 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
CBX6-203ENST00000469420 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
CBX6-203ENST00000469420 MT4P47944 62 aa4.27□□□□□ -1.73
CBX6-203ENST00000469420 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
CBX6-203ENST00000469420 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
CBX6-203ENST00000469420 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
CBX6-203ENST00000469420 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.74
CBX6-203ENST00000469420 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
CBX6-203ENST00000469420 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
CBX6-203ENST00000469420 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
CBX6-203ENST00000469420 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
CBX6-203ENST00000469420 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
CBX6-203ENST00000469420 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
CBX6-203ENST00000469420 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
CBX6-203ENST00000469420 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
CBX6-203ENST00000469420 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
CBX6-203ENST00000469420 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
CBX6-203ENST00000469420 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
CBX6-203ENST00000469420 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
CBX6-203ENST00000469420 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
CBX6-203ENST00000469420 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CBX6-203ENST00000469420 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
CBX6-203ENST00000469420 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
CBX6-203ENST00000469420 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
CBX6-203ENST00000469420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
CBX6-203ENST00000469420 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CBX6-203ENST00000469420 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
CBX6-203ENST00000469420 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
CBX6-203ENST00000469420 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
CBX6-203ENST00000469420 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
CBX6-203ENST00000469420 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
CBX6-203ENST00000469420 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
CBX6-203ENST00000469420 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
CBX6-203ENST00000469420 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 54.6 ms