RNA–Protein interactions for RNA: ENST00000468861.5

FXR1-207, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-207ENST00000468861 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
FXR1-207ENST00000468861 MT1XP80297 61 aa4.07□□□□□ -1.76
FXR1-207ENST00000468861 MT1BP07438 61 aa3.98□□□□□ -1.77
FXR1-207ENST00000468861 MT2AP02795 61 aa3.96□□□□□ -1.77
FXR1-207ENST00000468861 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
FXR1-207ENST00000468861 MT1FP04733 61 aa3.96□□□□□ -1.78
FXR1-207ENST00000468861 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
FXR1-207ENST00000468861 M0R2T5 61 aa3.94□□□□□ -1.78
FXR1-207ENST00000468861 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
FXR1-207ENST00000468861 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
FXR1-207ENST00000468861 MT1HP80294 61 aa3.88□□□□□ -1.79
FXR1-207ENST00000468861 MUC2Q02817 5179 aa3.85□□□□□ -1.79
FXR1-207ENST00000468861 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
FXR1-207ENST00000468861 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
FXR1-207ENST00000468861 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
FXR1-207ENST00000468861 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.81
FXR1-207ENST00000468861 KRTAP12-4P60329 112 aa3.65□□□□□ -1.82
FXR1-207ENST00000468861 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
FXR1-207ENST00000468861 MT1LQ93083 61 aa3.58□□□□□ -1.84
FXR1-207ENST00000468861 MT1EP04732 61 aa3.54□□□□□ -1.84
FXR1-207ENST00000468861 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
FXR1-207ENST00000468861 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
FXR1-207ENST00000468861 MT1AP04731 61 aa3.37□□□□□ -1.87
FXR1-207ENST00000468861 KMT2DO14686 5537 aa3.35□□□□□ -1.87
FXR1-207ENST00000468861 MT1GP13640 62 aa3.31□□□□□ -1.88
FXR1-207ENST00000468861 PRM1P04553 51 aa3.29□□□□□ -1.88
FXR1-207ENST00000468861 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
FXR1-207ENST00000468861 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
FXR1-207ENST00000468861 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
FXR1-207ENST00000468861 MT1MQ8N339 61 aa3.23□□□□□ -1.89
FXR1-207ENST00000468861 FSIP2Q5CZC0 6907 aa3.23□□□□□ -1.89
FXR1-207ENST00000468861 USH2AO75445 5202 aa3.21□□□□□ -1.9
FXR1-207ENST00000468861 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
FXR1-207ENST00000468861 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
FXR1-207ENST00000468861 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
FXR1-207ENST00000468861 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
FXR1-207ENST00000468861 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
FXR1-207ENST00000468861 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
FXR1-207ENST00000468861 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
FXR1-207ENST00000468861 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
FXR1-207ENST00000468861 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
FXR1-207ENST00000468861 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
FXR1-207ENST00000468861 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
FXR1-207ENST00000468861 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.95
FXR1-207ENST00000468861 SPRR2AP35326 72 aa2.89□□□□□ -1.95
FXR1-207ENST00000468861 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
FXR1-207ENST00000468861 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
FXR1-207ENST00000468861 NEBP20929 6669 aa2.8□□□□□ -1.96
FXR1-207ENST00000468861 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
FXR1-207ENST00000468861 SPRR2EP22531 72 aa2.79□□□□□ -1.96
FXR1-207ENST00000468861 SPRR2BP35325 72 aa2.76□□□□□ -1.97
FXR1-207ENST00000468861 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
FXR1-207ENST00000468861 SPRR2DP22532 72 aa2.69□□□□□ -1.98
FXR1-207ENST00000468861 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
FXR1-207ENST00000468861 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
FXR1-207ENST00000468861 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
FXR1-207ENST00000468861 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
FXR1-207ENST00000468861 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
FXR1-207ENST00000468861 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
FXR1-207ENST00000468861 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
FXR1-207ENST00000468861 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
FXR1-207ENST00000468861 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
FXR1-207ENST00000468861 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
FXR1-207ENST00000468861 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
FXR1-207ENST00000468861 MT4P47944 62 aa2.25□□□□□ -2.05
FXR1-207ENST00000468861 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
FXR1-207ENST00000468861 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
FXR1-207ENST00000468861 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
FXR1-207ENST00000468861 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
FXR1-207ENST00000468861 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
FXR1-207ENST00000468861 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
FXR1-207ENST00000468861 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
FXR1-207ENST00000468861 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
FXR1-207ENST00000468861 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
FXR1-207ENST00000468861 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
FXR1-207ENST00000468861 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
FXR1-207ENST00000468861 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 7.8 ms