RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 VPS13CQ709C8 3753 aa0.34□□□□□ -2.35
CDHR3-206ENST00000468477 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.35
CDHR3-206ENST00000468477 CSMD2Q7Z408 3487 aa0.34□□□□□ -2.35
CDHR3-206ENST00000468477 DEFB4AO15263 64 aa0.34□□□□□ -2.36
CDHR3-206ENST00000468477 MT1HP80294 61 aa0.34□□□□□ -2.36
CDHR3-206ENST00000468477 MT1EP04732 61 aa0.33□□□□□ -2.36
CDHR3-206ENST00000468477 Q9Y3F1 56 aa0.33□□□□□ -2.36
CDHR3-206ENST00000468477 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
CDHR3-206ENST00000468477 MUC17Q685J3 4493 aa0.33□□□□□ -2.36
CDHR3-206ENST00000468477 SRCAPQ6ZRS2 3230 aa0.32□□□□□ -2.36
CDHR3-206ENST00000468477 DCHS1Q96JQ0 3298 aa0.32□□□□□ -2.36
CDHR3-206ENST00000468477 BOD1L1Q8NFC6 3051 aa0.32□□□□□ -2.36
CDHR3-206ENST00000468477 MUC3AQ02505 3323 aa0.31□□□□□ -2.36
CDHR3-206ENST00000468477 XIRP2A4UGR9 3374 aa0.31□□□□□ -2.36
CDHR3-206ENST00000468477 MT1LQ93083 61 aa0.3□□□□□ -2.36
CDHR3-206ENST00000468477 COX14Q96I36 57 aa0.3□□□□□ -2.36
CDHR3-206ENST00000468477 WDFY4Q6ZS81 3184 aa0.3□□□□□ -2.36
CDHR3-206ENST00000468477 PCLOQ9Y6V0 5065 aa0.29□□□□□ -2.36
CDHR3-206ENST00000468477 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
CDHR3-206ENST00000468477 KMT2DO14686 5537 aa0.29□□□□□ -2.36
CDHR3-206ENST00000468477 SSPOA2VEC9 5147 aa0.28□□□□□ -2.37
CDHR3-206ENST00000468477 LAMA2P24043 3122 aaKnown RBP0.26□□□□□ -2.37
CDHR3-206ENST00000468477 KMT2CQ8NEZ4 4911 aaKnown RBP0.25□□□□□ -2.37
CDHR3-206ENST00000468477 HTN3P15516 51 aa0.25□□□□□ -2.37
CDHR3-206ENST00000468477 STARD9Q9P2P6 4700 aa0.23□□□□□ -2.37
CDHR3-206ENST00000468477 MT1XP80297 61 aa0.23□□□□□ -2.37
CDHR3-206ENST00000468477 SPRR2GQ9BYE4 73 aa0.23□□□□□ -2.37
CDHR3-206ENST00000468477 DNHD1Q96M86 4753 aa0.21□□□□□ -2.38
CDHR3-206ENST00000468477 USH2AO75445 5202 aa0.21□□□□□ -2.38
CDHR3-206ENST00000468477 MYO15AQ9UKN7 3530 aa0.21□□□□□ -2.38
CDHR3-206ENST00000468477 DSTQ03001 7570 aaKnown RBP0.2□□□□□ -2.38
CDHR3-206ENST00000468477 KRTAP19-7Q3SYF9 63 aa0.2□□□□□ -2.38
CDHR3-206ENST00000468477 CEP350Q5VT06 3117 aa0.19□□□□□ -2.38
CDHR3-206ENST00000468477 EYSQ5T1H1 3165 aa0.19□□□□□ -2.38
CDHR3-206ENST00000468477 UBR4Q5T4S7 5183 aa0.19□□□□□ -2.38
CDHR3-206ENST00000468477 RYR1P21817 5038 aa0.18□□□□□ -2.38
CDHR3-206ENST00000468477 LOC400499M0QZD8 3231 aa0.18□□□□□ -2.38
CDHR3-206ENST00000468477 PCNTO95613 3336 aa0.18□□□□□ -2.38
CDHR3-206ENST00000468477 KRTAP19-8Q3LI54 63 aa0.17□□□□□ -2.38
CDHR3-206ENST00000468477 MUC2Q02817 5179 aa0.17□□□□□ -2.38
CDHR3-206ENST00000468477 CFAP47Q6ZTR5 3102 aa0.17□□□□□ -2.38
CDHR3-206ENST00000468477 NEBP20929 6669 aa0.16□□□□□ -2.38
CDHR3-206ENST00000468477 MT1GP13640 62 aa0.15□□□□□ -2.39
CDHR3-206ENST00000468477 MUC12Q9UKN1 5478 aa0.15□□□□□ -2.39
CDHR3-206ENST00000468477 ASPMQ8IZT6 3477 aa0.14□□□□□ -2.39
CDHR3-206ENST00000468477 USP34Q70CQ2 3546 aa0.13□□□□□ -2.39
CDHR3-206ENST00000468477 KRTAP6-1Q3LI64 71 aa0.11□□□□□ -2.39
CDHR3-206ENST00000468477 UTRNP46939 3433 aa0.07□□□□□ -2.4
CDHR3-206ENST00000468477 SPEGQ15772 3267 aa0.07□□□□□ -2.4
CDHR3-206ENST00000468477 MT2AP02795 61 aa0.05□□□□□ -2.4
CDHR3-206ENST00000468477 MT1MQ8N339 61 aa0.05□□□□□ -2.4
CDHR3-206ENST00000468477 EP400Q96L91 3159 aa0.04□□□□□ -2.4
CDHR3-206ENST00000468477 UNC80Q8N2C7 3258 aa0.04□□□□□ -2.4
CDHR3-206ENST00000468477 HERC2O95714 4834 aa0.04□□□□□ -2.4
CDHR3-206ENST00000468477 VPS13AQ96RL7 3174 aa0.03□□□□□ -2.4
CDHR3-206ENST00000468477 WDFY3Q8IZQ1 3526 aa0.03□□□□□ -2.41
CDHR3-206ENST00000468477 VCANP13611 3396 aa0.01□□□□□ -2.41
CDHR3-206ENST00000468477 MT1HL1P0DM35 61 aa0.01□□□□□ -2.41
CDHR3-206ENST00000468477 BIRC6Q9NR09 4857 aa0.01□□□□□ -2.41
CDHR3-206ENST00000468477 RYR3Q15413 4870 aa0□□□□□ -2.41
CDHR3-206ENST00000468477 GOLGB1Q14789 3259 aaKnown RBP-0.02□□□□□ -2.41
CDHR3-206ENST00000468477 BRCA2P51587 3418 aa-0.02□□□□□ -2.41
CDHR3-206ENST00000468477 EPPK1P58107 5090 aaKnown RBP-0.03□□□□□ -2.41
CDHR3-206ENST00000468477 KRTAP20-2Q3LI61 65 aa-0.03□□□□□ -2.41
CDHR3-206ENST00000468477 MT4P47944 62 aa-0.05□□□□□ -2.42
CDHR3-206ENST00000468477 RNF213Q63HN8 5207 aa-0.06□□□□□ -2.42
CDHR3-206ENST00000468477 HYDINQ4G0P3 5121 aa-0.06□□□□□ -2.42
CDHR3-206ENST00000468477 MT1BP07438 61 aa-0.07□□□□□ -2.42
CDHR3-206ENST00000468477 CENPFP49454 3210 aa-0.09□□□□□ -2.42
CDHR3-206ENST00000468477 DNAH14Q0VDD8 3507 aa-0.11□□□□□ -2.43
CDHR3-206ENST00000468477 RYR2Q92736 4967 aa-0.11□□□□□ -2.43
CDHR3-206ENST00000468477 ABCA13Q86UQ4 5058 aa-0.15□□□□□ -2.43
CDHR3-206ENST00000468477 MT1FP04733 61 aa-0.15□□□□□ -2.43
CDHR3-206ENST00000468477 KRTAP19-2Q3LHN2 52 aa-0.15□□□□□ -2.43
CDHR3-206ENST00000468477 KIAA1109Q2LD37 5005 aa-0.16□□□□□ -2.44
CDHR3-206ENST00000468477 KRTAP20-1Q3LI63 56 aa-0.17□□□□□ -2.44
CDHR3-206ENST00000468477 CDH23Q9H251 3354 aa-0.27□□□□□ -2.45
CDHR3-206ENST00000468477 KRTAP19-6Q3LI70 58 aa-0.37□□□□□ -2.47
Retrieved 78 of 20,778 RNA–protein pairs in 79.5 ms