RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
LINC00888-201ENST00000468380 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
LINC00888-201ENST00000468380 TNP1P09430 55 aa5.96□□□□□ -1.46
LINC00888-201ENST00000468380 A0A1B0GU33 70 aa5.94□□□□□ -1.46
LINC00888-201ENST00000468380 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
LINC00888-201ENST00000468380 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
LINC00888-201ENST00000468380 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
LINC00888-201ENST00000468380 SEC61GP60059 68 aa5.9□□□□□ -1.46
LINC00888-201ENST00000468380 AHNAKQ09666 5890 aaKnown RBP5.87□□□□□ -1.47
LINC00888-201ENST00000468380 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
LINC00888-201ENST00000468380 MUC5ACP98088 5654 aa5.87□□□□□ -1.47
LINC00888-201ENST00000468380 A0A0A0MQY5 61 aa5.85□□□□□ -1.47
LINC00888-201ENST00000468380 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
LINC00888-201ENST00000468380 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.47
LINC00888-201ENST00000468380 COA5Q86WW8 74 aa5.83□□□□□ -1.48
LINC00888-201ENST00000468380 KRTAP5-2Q701N4 177 aa5.81□□□□□ -1.48
LINC00888-201ENST00000468380 A8MU10 97 aa5.79□□□□□ -1.48
LINC00888-201ENST00000468380 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
LINC00888-201ENST00000468380 J3QR89 54 aa5.75□□□□□ -1.49
LINC00888-201ENST00000468380 SMIM26A0A096LP01 95 aa5.72□□□□□ -1.49
LINC00888-201ENST00000468380 A0A1B0GV90 55 aa5.67□□□□□ -1.5
LINC00888-201ENST00000468380 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
LINC00888-201ENST00000468380 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
LINC00888-201ENST00000468380 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
LINC00888-201ENST00000468380 MT1AP04731 61 aa5.56□□□□□ -1.52
LINC00888-201ENST00000468380 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
LINC00888-201ENST00000468380 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
LINC00888-201ENST00000468380 A0A1B0GU69 56 aa5.51□□□□□ -1.53
LINC00888-201ENST00000468380 SERP2Q8N6R1 65 aa5.51□□□□□ -1.53
LINC00888-201ENST00000468380 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
LINC00888-201ENST00000468380 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
LINC00888-201ENST00000468380 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
LINC00888-201ENST00000468380 KRTAP5-1Q6L8H4 278 aa5.35□□□□□ -1.55
LINC00888-201ENST00000468380 H7BZZ5 65 aa5.27□□□□□ -1.57
LINC00888-201ENST00000468380 K7ERU9 68 aa5.24□□□□□ -1.57
LINC00888-201ENST00000468380 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
LINC00888-201ENST00000468380 COX7CP15954 63 aa5.15□□□□□ -1.59
LINC00888-201ENST00000468380 MT3P25713 68 aa5.1□□□□□ -1.59
LINC00888-201ENST00000468380 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
LINC00888-201ENST00000468380 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
LINC00888-201ENST00000468380 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
LINC00888-201ENST00000468380 UQCR11O14957 56 aa4.96□□□□□ -1.62
LINC00888-201ENST00000468380 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
LINC00888-201ENST00000468380 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
LINC00888-201ENST00000468380 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
LINC00888-201ENST00000468380 K7ERS5 55 aa4.76□□□□□ -1.65
LINC00888-201ENST00000468380 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
LINC00888-201ENST00000468380 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
LINC00888-201ENST00000468380 ATP5EP56381 51 aaPredicted RBP4.62□□□□□ -1.67
LINC00888-201ENST00000468380 CCDC179H3BU77 68 aa4.6□□□□□ -1.67
LINC00888-201ENST00000468380 ANAPC13Q9BS18 74 aa4.57□□□□□ -1.68
LINC00888-201ENST00000468380 V9GYY9 64 aa4.57□□□□□ -1.68
LINC00888-201ENST00000468380 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
LINC00888-201ENST00000468380 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
LINC00888-201ENST00000468380 Q1T7F1 81 aa4.47□□□□□ -1.69
LINC00888-201ENST00000468380 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
LINC00888-201ENST00000468380 PSPHP1O15172 72 aa4.38□□□□□ -1.71
LINC00888-201ENST00000468380 ROMO1P60602 79 aa4.38□□□□□ -1.71
LINC00888-201ENST00000468380 TMEM258P61165 79 aa4.28□□□□□ -1.72
LINC00888-201ENST00000468380 PRO0628Q9UI54 55 aa4.28□□□□□ -1.72
LINC00888-201ENST00000468380 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
LINC00888-201ENST00000468380 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
LINC00888-201ENST00000468380 A6NED7 52 aa4.13□□□□□ -1.75
LINC00888-201ENST00000468380 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
LINC00888-201ENST00000468380 PHGR1C9JFL3 82 aa4.07□□□□□ -1.76
LINC00888-201ENST00000468380 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
LINC00888-201ENST00000468380 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
LINC00888-201ENST00000468380 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
LINC00888-201ENST00000468380 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
LINC00888-201ENST00000468380 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
LINC00888-201ENST00000468380 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
LINC00888-201ENST00000468380 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
LINC00888-201ENST00000468380 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
LINC00888-201ENST00000468380 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
LINC00888-201ENST00000468380 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
LINC00888-201ENST00000468380 INE1O15225 51 aa2.75□□□□□ -1.97
LINC00888-201ENST00000468380 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
LINC00888-201ENST00000468380 PRM1P04553 51 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms