RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 KRTAP19-3Q7Z4W3 81 aa6.99□□□□□ -1.29
CCDC78-207ENST00000466708 MT1GP13640 62 aa6.97□□□□□ -1.29
CCDC78-207ENST00000466708 KRTAP9-6A8MVA2 160 aa6.96□□□□□ -1.3
CCDC78-207ENST00000466708 SPRR2FQ96RM1 72 aa6.94□□□□□ -1.3
CCDC78-207ENST00000466708 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
CCDC78-207ENST00000466708 MT1MQ8N339 61 aa6.88□□□□□ -1.31
CCDC78-207ENST00000466708 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
CCDC78-207ENST00000466708 MUC12Q9UKN1 5478 aa6.84□□□□□ -1.31
CCDC78-207ENST00000466708 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
CCDC78-207ENST00000466708 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
CCDC78-207ENST00000466708 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
CCDC78-207ENST00000466708 KRTAP4-3Q9BYR4 195 aa6.75□□□□□ -1.33
CCDC78-207ENST00000466708 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
CCDC78-207ENST00000466708 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
CCDC78-207ENST00000466708 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
CCDC78-207ENST00000466708 KRTAP2-1Q9BYU5 128 aa6.62□□□□□ -1.35
CCDC78-207ENST00000466708 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
CCDC78-207ENST00000466708 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
CCDC78-207ENST00000466708 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.36
CCDC78-207ENST00000466708 SPRR2EP22531 72 aa6.48□□□□□ -1.37
CCDC78-207ENST00000466708 SPRR2BP35325 72 aa6.48□□□□□ -1.37
CCDC78-207ENST00000466708 SPRR2AP35326 72 aa6.48□□□□□ -1.37
CCDC78-207ENST00000466708 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
CCDC78-207ENST00000466708 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
CCDC78-207ENST00000466708 INE1O15225 51 aa6.43□□□□□ -1.38
CCDC78-207ENST00000466708 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
CCDC78-207ENST00000466708 SPRR2DP22532 72 aa6.24□□□□□ -1.41
CCDC78-207ENST00000466708 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
CCDC78-207ENST00000466708 MT1AP04731 61 aa6.15□□□□□ -1.43
CCDC78-207ENST00000466708 NEBP20929 6669 aa6.14□□□□□ -1.43
CCDC78-207ENST00000466708 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
CCDC78-207ENST00000466708 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
CCDC78-207ENST00000466708 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
CCDC78-207ENST00000466708 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
CCDC78-207ENST00000466708 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
CCDC78-207ENST00000466708 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
CCDC78-207ENST00000466708 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
CCDC78-207ENST00000466708 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
CCDC78-207ENST00000466708 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
CCDC78-207ENST00000466708 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
CCDC78-207ENST00000466708 MT3P25713 68 aa5.57□□□□□ -1.52
CCDC78-207ENST00000466708 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
CCDC78-207ENST00000466708 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
CCDC78-207ENST00000466708 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
CCDC78-207ENST00000466708 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
CCDC78-207ENST00000466708 MT4P47944 62 aa5.4□□□□□ -1.54
CCDC78-207ENST00000466708 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
CCDC78-207ENST00000466708 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
CCDC78-207ENST00000466708 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
CCDC78-207ENST00000466708 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
CCDC78-207ENST00000466708 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
CCDC78-207ENST00000466708 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
CCDC78-207ENST00000466708 PRM1P04553 51 aa4.93□□□□□ -1.62
CCDC78-207ENST00000466708 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
CCDC78-207ENST00000466708 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CCDC78-207ENST00000466708 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
CCDC78-207ENST00000466708 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
CCDC78-207ENST00000466708 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
CCDC78-207ENST00000466708 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
CCDC78-207ENST00000466708 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
CCDC78-207ENST00000466708 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
CCDC78-207ENST00000466708 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
CCDC78-207ENST00000466708 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.7
CCDC78-207ENST00000466708 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
CCDC78-207ENST00000466708 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
CCDC78-207ENST00000466708 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
CCDC78-207ENST00000466708 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
CCDC78-207ENST00000466708 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
CCDC78-207ENST00000466708 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CCDC78-207ENST00000466708 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
CCDC78-207ENST00000466708 AHNAKQ09666 5890 aaKnown RBP3.79□□□□□ -1.8
CCDC78-207ENST00000466708 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
CCDC78-207ENST00000466708 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
CCDC78-207ENST00000466708 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CCDC78-207ENST00000466708 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
CCDC78-207ENST00000466708 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.92
CCDC78-207ENST00000466708 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CCDC78-207ENST00000466708 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 91.3 ms