RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 KRTAP10-7P60409 375 aaPredicted RBP1.74□□□□□ -2.13
CLCA3P-202ENST00000466454 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
CLCA3P-202ENST00000466454 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
CLCA3P-202ENST00000466454 PCLOQ9Y6V0 5065 aa1.71□□□□□ -2.14
CLCA3P-202ENST00000466454 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
CLCA3P-202ENST00000466454 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
CLCA3P-202ENST00000466454 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
CLCA3P-202ENST00000466454 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
CLCA3P-202ENST00000466454 MT1HP80294 61 aa1.68□□□□□ -2.14
CLCA3P-202ENST00000466454 MT2AP02795 61 aa1.67□□□□□ -2.14
CLCA3P-202ENST00000466454 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
CLCA3P-202ENST00000466454 LCE3AQ5TA76 89 aa1.66□□□□□ -2.14
CLCA3P-202ENST00000466454 MT1FP04733 61 aa1.65□□□□□ -2.14
CLCA3P-202ENST00000466454 MT1BP07438 61 aa1.65□□□□□ -2.15
CLCA3P-202ENST00000466454 MT1XP80297 61 aa1.64□□□□□ -2.15
CLCA3P-202ENST00000466454 KRTAP9-6A8MVA2 160 aa1.6□□□□□ -2.15
CLCA3P-202ENST00000466454 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
CLCA3P-202ENST00000466454 MUC2Q02817 5179 aa1.59□□□□□ -2.15
CLCA3P-202ENST00000466454 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.15
CLCA3P-202ENST00000466454 UBR4Q5T4S7 5183 aa1.59□□□□□ -2.16
CLCA3P-202ENST00000466454 RNF213Q63HN8 5207 aa1.57□□□□□ -2.16
CLCA3P-202ENST00000466454 FAT4Q6V0I7 4981 aa1.56□□□□□ -2.16
CLCA3P-202ENST00000466454 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
CLCA3P-202ENST00000466454 M0R2T5 61 aa1.54□□□□□ -2.16
CLCA3P-202ENST00000466454 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
CLCA3P-202ENST00000466454 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
CLCA3P-202ENST00000466454 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
CLCA3P-202ENST00000466454 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
CLCA3P-202ENST00000466454 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CLCA3P-202ENST00000466454 KRTAP19-5Q3LI72 72 aa1.5□□□□□ -2.17
CLCA3P-202ENST00000466454 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
CLCA3P-202ENST00000466454 KRTAP19-7Q3SYF9 63 aa1.47□□□□□ -2.17
CLCA3P-202ENST00000466454 MT1EP04732 61 aa1.44□□□□□ -2.18
CLCA3P-202ENST00000466454 MT1LQ93083 61 aa1.43□□□□□ -2.18
CLCA3P-202ENST00000466454 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
CLCA3P-202ENST00000466454 CRCT1Q9UGL9 99 aa1.38□□□□□ -2.19
CLCA3P-202ENST00000466454 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
CLCA3P-202ENST00000466454 USH2AO75445 5202 aa1.37□□□□□ -2.19
CLCA3P-202ENST00000466454 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
CLCA3P-202ENST00000466454 MT1GP13640 62 aa1.34□□□□□ -2.19
CLCA3P-202ENST00000466454 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
CLCA3P-202ENST00000466454 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
CLCA3P-202ENST00000466454 MT1MQ8N339 61 aa1.32□□□□□ -2.2
CLCA3P-202ENST00000466454 MT1AP04731 61 aa1.31□□□□□ -2.2
CLCA3P-202ENST00000466454 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
CLCA3P-202ENST00000466454 KRTAP4-3Q9BYR4 195 aa1.28□□□□□ -2.21
CLCA3P-202ENST00000466454 KMT2DO14686 5537 aa1.27□□□□□ -2.21
CLCA3P-202ENST00000466454 NEBP20929 6669 aa1.26□□□□□ -2.21
CLCA3P-202ENST00000466454 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
CLCA3P-202ENST00000466454 LCE1CQ5T751 118 aa1.22□□□□□ -2.21
CLCA3P-202ENST00000466454 LCE1BQ5T7P3 118 aa1.22□□□□□ -2.21
CLCA3P-202ENST00000466454 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
CLCA3P-202ENST00000466454 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
CLCA3P-202ENST00000466454 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
CLCA3P-202ENST00000466454 FCGBPQ9Y6R7 5405 aaPredicted RBP1.16□□□□□ -2.22
CLCA3P-202ENST00000466454 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.22
CLCA3P-202ENST00000466454 PRM1P04553 51 aa1.15□□□□□ -2.23
CLCA3P-202ENST00000466454 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
CLCA3P-202ENST00000466454 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
CLCA3P-202ENST00000466454 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
CLCA3P-202ENST00000466454 SYNE2Q8WXH0 6885 aaKnown RBP1.09□□□□□ -2.23
CLCA3P-202ENST00000466454 SPRR2AP35326 72 aa1.09□□□□□ -2.24
CLCA3P-202ENST00000466454 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
CLCA3P-202ENST00000466454 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
CLCA3P-202ENST00000466454 SPRR2EP22531 72 aa1.04□□□□□ -2.24
CLCA3P-202ENST00000466454 SPRR2BP35325 72 aa1.04□□□□□ -2.24
CLCA3P-202ENST00000466454 MDN1Q9NU22 5596 aa1.03□□□□□ -2.24
CLCA3P-202ENST00000466454 SYNE1Q8NF91 8797 aaKnown RBP1.01□□□□□ -2.25
CLCA3P-202ENST00000466454 SPRR2DP22532 72 aa1.01□□□□□ -2.25
CLCA3P-202ENST00000466454 DSTQ03001 7570 aaKnown RBP0.98□□□□□ -2.25
CLCA3P-202ENST00000466454 FSIP2Q5CZC0 6907 aa0.96□□□□□ -2.26
CLCA3P-202ENST00000466454 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
CLCA3P-202ENST00000466454 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
CLCA3P-202ENST00000466454 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.28
CLCA3P-202ENST00000466454 MT4P47944 62 aa0.81□□□□□ -2.28
CLCA3P-202ENST00000466454 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
CLCA3P-202ENST00000466454 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 67.3 ms