RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
PDZRN3-204ENST00000466348 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
PDZRN3-204ENST00000466348 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
PDZRN3-204ENST00000466348 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
PDZRN3-204ENST00000466348 MT1MQ8N339 61 aa3.64□□□□□ -1.83
PDZRN3-204ENST00000466348 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
PDZRN3-204ENST00000466348 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
PDZRN3-204ENST00000466348 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
PDZRN3-204ENST00000466348 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
PDZRN3-204ENST00000466348 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
PDZRN3-204ENST00000466348 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
PDZRN3-204ENST00000466348 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
PDZRN3-204ENST00000466348 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
PDZRN3-204ENST00000466348 SPRR2EP22531 72 aa3.5□□□□□ -1.85
PDZRN3-204ENST00000466348 SPRR2BP35325 72 aa3.5□□□□□ -1.85
PDZRN3-204ENST00000466348 SPRR2AP35326 72 aa3.5□□□□□ -1.85
PDZRN3-204ENST00000466348 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
PDZRN3-204ENST00000466348 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
PDZRN3-204ENST00000466348 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
PDZRN3-204ENST00000466348 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
PDZRN3-204ENST00000466348 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
PDZRN3-204ENST00000466348 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
PDZRN3-204ENST00000466348 SPRR2DP22532 72 aa3.37□□□□□ -1.87
PDZRN3-204ENST00000466348 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.87
PDZRN3-204ENST00000466348 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
PDZRN3-204ENST00000466348 INE1O15225 51 aa3.29□□□□□ -1.88
PDZRN3-204ENST00000466348 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
PDZRN3-204ENST00000466348 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
PDZRN3-204ENST00000466348 MT1AP04731 61 aa3.27□□□□□ -1.89
PDZRN3-204ENST00000466348 NEBP20929 6669 aa3.24□□□□□ -1.89
PDZRN3-204ENST00000466348 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
PDZRN3-204ENST00000466348 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
PDZRN3-204ENST00000466348 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
PDZRN3-204ENST00000466348 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
PDZRN3-204ENST00000466348 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
PDZRN3-204ENST00000466348 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
PDZRN3-204ENST00000466348 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
PDZRN3-204ENST00000466348 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
PDZRN3-204ENST00000466348 MT3P25713 68 aa2.99□□□□□ -1.93
PDZRN3-204ENST00000466348 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
PDZRN3-204ENST00000466348 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
PDZRN3-204ENST00000466348 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
PDZRN3-204ENST00000466348 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
PDZRN3-204ENST00000466348 MT4P47944 62 aa2.87□□□□□ -1.95
PDZRN3-204ENST00000466348 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
PDZRN3-204ENST00000466348 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
PDZRN3-204ENST00000466348 KRTAP4-6Q9BYQ5 205 aa2.87□□□□□ -1.95
PDZRN3-204ENST00000466348 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
PDZRN3-204ENST00000466348 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
PDZRN3-204ENST00000466348 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
PDZRN3-204ENST00000466348 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
PDZRN3-204ENST00000466348 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
PDZRN3-204ENST00000466348 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
PDZRN3-204ENST00000466348 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
PDZRN3-204ENST00000466348 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
PDZRN3-204ENST00000466348 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
PDZRN3-204ENST00000466348 PRM1P04553 51 aa2.48□□□□□ -2.01
PDZRN3-204ENST00000466348 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
PDZRN3-204ENST00000466348 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
PDZRN3-204ENST00000466348 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
PDZRN3-204ENST00000466348 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
PDZRN3-204ENST00000466348 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
PDZRN3-204ENST00000466348 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
PDZRN3-204ENST00000466348 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
PDZRN3-204ENST00000466348 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
PDZRN3-204ENST00000466348 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
PDZRN3-204ENST00000466348 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
PDZRN3-204ENST00000466348 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
PDZRN3-204ENST00000466348 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
PDZRN3-204ENST00000466348 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
PDZRN3-204ENST00000466348 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
PDZRN3-204ENST00000466348 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
PDZRN3-204ENST00000466348 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
PDZRN3-204ENST00000466348 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
PDZRN3-204ENST00000466348 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
PDZRN3-204ENST00000466348 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
PDZRN3-204ENST00000466348 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
PDZRN3-204ENST00000466348 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 77.7 ms