RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 MT1EP04732 61 aa4.58□□□□□ -1.68
TGFBR3-204ENST00000465892 SSPOA2VEC9 5147 aa4.57□□□□□ -1.68
TGFBR3-204ENST00000465892 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
TGFBR3-204ENST00000465892 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
TGFBR3-204ENST00000465892 MT1GP13640 62 aa4.52□□□□□ -1.69
TGFBR3-204ENST00000465892 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
TGFBR3-204ENST00000465892 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
TGFBR3-204ENST00000465892 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
TGFBR3-204ENST00000465892 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
TGFBR3-204ENST00000465892 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
TGFBR3-204ENST00000465892 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
TGFBR3-204ENST00000465892 MT1MQ8N339 61 aa4.27□□□□□ -1.73
TGFBR3-204ENST00000465892 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
TGFBR3-204ENST00000465892 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
TGFBR3-204ENST00000465892 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
TGFBR3-204ENST00000465892 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
TGFBR3-204ENST00000465892 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
TGFBR3-204ENST00000465892 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
TGFBR3-204ENST00000465892 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
TGFBR3-204ENST00000465892 PRM1P04553 51 aa4.08□□□□□ -1.76
TGFBR3-204ENST00000465892 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
TGFBR3-204ENST00000465892 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
TGFBR3-204ENST00000465892 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
TGFBR3-204ENST00000465892 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
TGFBR3-204ENST00000465892 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
TGFBR3-204ENST00000465892 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
TGFBR3-204ENST00000465892 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
TGFBR3-204ENST00000465892 MT1AP04731 61 aa3.96□□□□□ -1.78
TGFBR3-204ENST00000465892 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
TGFBR3-204ENST00000465892 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
TGFBR3-204ENST00000465892 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
TGFBR3-204ENST00000465892 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
TGFBR3-204ENST00000465892 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
TGFBR3-204ENST00000465892 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
TGFBR3-204ENST00000465892 SPRR2EP22531 72 aa3.69□□□□□ -1.82
TGFBR3-204ENST00000465892 SPRR2BP35325 72 aa3.69□□□□□ -1.82
TGFBR3-204ENST00000465892 SPRR2AP35326 72 aa3.69□□□□□ -1.82
TGFBR3-204ENST00000465892 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.84
TGFBR3-204ENST00000465892 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
TGFBR3-204ENST00000465892 SPRR2DP22532 72 aa3.53□□□□□ -1.84
TGFBR3-204ENST00000465892 NEBP20929 6669 aa3.47□□□□□ -1.85
TGFBR3-204ENST00000465892 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
TGFBR3-204ENST00000465892 MT3P25713 68 aa3.43□□□□□ -1.86
TGFBR3-204ENST00000465892 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
TGFBR3-204ENST00000465892 MT4P47944 62 aa3.2□□□□□ -1.9
TGFBR3-204ENST00000465892 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
TGFBR3-204ENST00000465892 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
TGFBR3-204ENST00000465892 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
TGFBR3-204ENST00000465892 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
TGFBR3-204ENST00000465892 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
TGFBR3-204ENST00000465892 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
TGFBR3-204ENST00000465892 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.93
TGFBR3-204ENST00000465892 LCE4AQ5TA78 99 aa2.96□□□□□ -1.93
TGFBR3-204ENST00000465892 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
TGFBR3-204ENST00000465892 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
TGFBR3-204ENST00000465892 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
TGFBR3-204ENST00000465892 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TGFBR3-204ENST00000465892 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
TGFBR3-204ENST00000465892 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
TGFBR3-204ENST00000465892 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
TGFBR3-204ENST00000465892 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
TGFBR3-204ENST00000465892 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
TGFBR3-204ENST00000465892 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
TGFBR3-204ENST00000465892 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
TGFBR3-204ENST00000465892 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
TGFBR3-204ENST00000465892 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
TGFBR3-204ENST00000465892 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
TGFBR3-204ENST00000465892 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
TGFBR3-204ENST00000465892 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
TGFBR3-204ENST00000465892 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.03
TGFBR3-204ENST00000465892 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
TGFBR3-204ENST00000465892 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
TGFBR3-204ENST00000465892 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
TGFBR3-204ENST00000465892 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
TGFBR3-204ENST00000465892 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
TGFBR3-204ENST00000465892 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
TGFBR3-204ENST00000465892 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 214.2 ms