RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
CCDC115-204ENST00000465315 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
CCDC115-204ENST00000465315 MT1LQ93083 61 aa3.9□□□□□ -1.78
CCDC115-204ENST00000465315 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
CCDC115-204ENST00000465315 MT1EP04732 61 aa3.89□□□□□ -1.79
CCDC115-204ENST00000465315 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
CCDC115-204ENST00000465315 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
CCDC115-204ENST00000465315 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
CCDC115-204ENST00000465315 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
CCDC115-204ENST00000465315 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
CCDC115-204ENST00000465315 MT1GP13640 62 aa3.84□□□□□ -1.8
CCDC115-204ENST00000465315 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
CCDC115-204ENST00000465315 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
CCDC115-204ENST00000465315 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
CCDC115-204ENST00000465315 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
CCDC115-204ENST00000465315 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
CCDC115-204ENST00000465315 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
CCDC115-204ENST00000465315 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
CCDC115-204ENST00000465315 MT1MQ8N339 61 aa3.66□□□□□ -1.82
CCDC115-204ENST00000465315 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
CCDC115-204ENST00000465315 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
CCDC115-204ENST00000465315 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
CCDC115-204ENST00000465315 SPRR2EP22531 72 aa3.62□□□□□ -1.83
CCDC115-204ENST00000465315 SPRR2BP35325 72 aa3.62□□□□□ -1.83
CCDC115-204ENST00000465315 SPRR2AP35326 72 aa3.62□□□□□ -1.83
CCDC115-204ENST00000465315 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
CCDC115-204ENST00000465315 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
CCDC115-204ENST00000465315 SPRR2DP22532 72 aa3.47□□□□□ -1.85
CCDC115-204ENST00000465315 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
CCDC115-204ENST00000465315 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
CCDC115-204ENST00000465315 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
CCDC115-204ENST00000465315 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
CCDC115-204ENST00000465315 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
CCDC115-204ENST00000465315 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
CCDC115-204ENST00000465315 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
CCDC115-204ENST00000465315 PRM1P04553 51 aa3.32□□□□□ -1.88
CCDC115-204ENST00000465315 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CCDC115-204ENST00000465315 MT1AP04731 61 aa3.25□□□□□ -1.89
CCDC115-204ENST00000465315 NEBP20929 6669 aa3.22□□□□□ -1.89
CCDC115-204ENST00000465315 MT4P47944 62 aa3.14□□□□□ -1.91
CCDC115-204ENST00000465315 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
CCDC115-204ENST00000465315 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
CCDC115-204ENST00000465315 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
CCDC115-204ENST00000465315 MT3P25713 68 aa3.02□□□□□ -1.93
CCDC115-204ENST00000465315 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
CCDC115-204ENST00000465315 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
CCDC115-204ENST00000465315 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
CCDC115-204ENST00000465315 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
CCDC115-204ENST00000465315 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
CCDC115-204ENST00000465315 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
CCDC115-204ENST00000465315 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
CCDC115-204ENST00000465315 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
CCDC115-204ENST00000465315 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
CCDC115-204ENST00000465315 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
CCDC115-204ENST00000465315 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
CCDC115-204ENST00000465315 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
CCDC115-204ENST00000465315 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
CCDC115-204ENST00000465315 LCE1FQ5T754 118 aa2.55□□□□□ -2
CCDC115-204ENST00000465315 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CCDC115-204ENST00000465315 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
CCDC115-204ENST00000465315 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
CCDC115-204ENST00000465315 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
CCDC115-204ENST00000465315 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
CCDC115-204ENST00000465315 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
CCDC115-204ENST00000465315 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
CCDC115-204ENST00000465315 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
CCDC115-204ENST00000465315 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
CCDC115-204ENST00000465315 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
CCDC115-204ENST00000465315 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
CCDC115-204ENST00000465315 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.06
CCDC115-204ENST00000465315 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
CCDC115-204ENST00000465315 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
CCDC115-204ENST00000465315 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
CCDC115-204ENST00000465315 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
CCDC115-204ENST00000465315 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CCDC115-204ENST00000465315 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CCDC115-204ENST00000465315 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CCDC115-204ENST00000465315 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms