RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 KRTAP9-6A8MVA2 160 aa6.6□□□□□ -1.35
TSPAN4-210ENST00000464987 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
TSPAN4-210ENST00000464987 MT1EP04732 61 aa6.56□□□□□ -1.36
TSPAN4-210ENST00000464987 MT1LQ93083 61 aa6.53□□□□□ -1.36
TSPAN4-210ENST00000464987 MACF1Q9UPN3 7388 aaKnown RBP6.51□□□□□ -1.37
TSPAN4-210ENST00000464987 SYNE2Q8WXH0 6885 aaKnown RBP6.47□□□□□ -1.37
TSPAN4-210ENST00000464987 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
TSPAN4-210ENST00000464987 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
TSPAN4-210ENST00000464987 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
TSPAN4-210ENST00000464987 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
TSPAN4-210ENST00000464987 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
TSPAN4-210ENST00000464987 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
TSPAN4-210ENST00000464987 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
TSPAN4-210ENST00000464987 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
TSPAN4-210ENST00000464987 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
TSPAN4-210ENST00000464987 MT1MQ8N339 61 aa6.14□□□□□ -1.43
TSPAN4-210ENST00000464987 MT1GP13640 62 aa6.12□□□□□ -1.43
TSPAN4-210ENST00000464987 KRTAP5-9P26371 169 aa6.06□□□□□ -1.44
TSPAN4-210ENST00000464987 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
TSPAN4-210ENST00000464987 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
TSPAN4-210ENST00000464987 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
TSPAN4-210ENST00000464987 NEBP20929 6669 aa5.95□□□□□ -1.46
TSPAN4-210ENST00000464987 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
TSPAN4-210ENST00000464987 SPRR2EP22531 72 aa5.84□□□□□ -1.47
TSPAN4-210ENST00000464987 SPRR2BP35325 72 aa5.84□□□□□ -1.47
TSPAN4-210ENST00000464987 SPRR2AP35326 72 aa5.84□□□□□ -1.47
TSPAN4-210ENST00000464987 KRTAP20-1Q3LI63 56 aa5.79□□□□□ -1.48
TSPAN4-210ENST00000464987 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
TSPAN4-210ENST00000464987 SPRR2DP22532 72 aa5.64□□□□□ -1.51
TSPAN4-210ENST00000464987 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
TSPAN4-210ENST00000464987 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
TSPAN4-210ENST00000464987 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
TSPAN4-210ENST00000464987 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
TSPAN4-210ENST00000464987 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
TSPAN4-210ENST00000464987 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
TSPAN4-210ENST00000464987 MT1AP04731 61 aa5.47□□□□□ -1.53
TSPAN4-210ENST00000464987 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
TSPAN4-210ENST00000464987 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
TSPAN4-210ENST00000464987 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
TSPAN4-210ENST00000464987 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
TSPAN4-210ENST00000464987 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
TSPAN4-210ENST00000464987 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
TSPAN4-210ENST00000464987 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
TSPAN4-210ENST00000464987 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
TSPAN4-210ENST00000464987 MT4P47944 62 aa4.92□□□□□ -1.62
TSPAN4-210ENST00000464987 MT3P25713 68 aa4.9□□□□□ -1.63
TSPAN4-210ENST00000464987 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
TSPAN4-210ENST00000464987 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
TSPAN4-210ENST00000464987 PRM1P04553 51 aa4.83□□□□□ -1.64
TSPAN4-210ENST00000464987 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
TSPAN4-210ENST00000464987 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
TSPAN4-210ENST00000464987 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
TSPAN4-210ENST00000464987 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
TSPAN4-210ENST00000464987 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.68
TSPAN4-210ENST00000464987 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
TSPAN4-210ENST00000464987 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
TSPAN4-210ENST00000464987 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
TSPAN4-210ENST00000464987 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
TSPAN4-210ENST00000464987 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
TSPAN4-210ENST00000464987 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
TSPAN4-210ENST00000464987 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
TSPAN4-210ENST00000464987 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
TSPAN4-210ENST00000464987 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
TSPAN4-210ENST00000464987 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
TSPAN4-210ENST00000464987 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
TSPAN4-210ENST00000464987 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
TSPAN4-210ENST00000464987 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
TSPAN4-210ENST00000464987 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
TSPAN4-210ENST00000464987 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
TSPAN4-210ENST00000464987 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
TSPAN4-210ENST00000464987 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
TSPAN4-210ENST00000464987 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
TSPAN4-210ENST00000464987 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
TSPAN4-210ENST00000464987 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
TSPAN4-210ENST00000464987 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
TSPAN4-210ENST00000464987 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
TSPAN4-210ENST00000464987 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
TSPAN4-210ENST00000464987 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 73.2 ms