RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
CLCNKA-204ENST00000464764 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
CLCNKA-204ENST00000464764 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
CLCNKA-204ENST00000464764 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
CLCNKA-204ENST00000464764 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
CLCNKA-204ENST00000464764 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
CLCNKA-204ENST00000464764 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
CLCNKA-204ENST00000464764 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
CLCNKA-204ENST00000464764 MT1GP13640 62 aa4.1□□□□□ -1.75
CLCNKA-204ENST00000464764 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
CLCNKA-204ENST00000464764 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
CLCNKA-204ENST00000464764 MT1MQ8N339 61 aa3.93□□□□□ -1.78
CLCNKA-204ENST00000464764 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
CLCNKA-204ENST00000464764 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
CLCNKA-204ENST00000464764 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
CLCNKA-204ENST00000464764 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
CLCNKA-204ENST00000464764 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
CLCNKA-204ENST00000464764 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
CLCNKA-204ENST00000464764 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
CLCNKA-204ENST00000464764 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
CLCNKA-204ENST00000464764 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
CLCNKA-204ENST00000464764 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
CLCNKA-204ENST00000464764 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
CLCNKA-204ENST00000464764 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
CLCNKA-204ENST00000464764 PRM1P04553 51 aa3.61□□□□□ -1.83
CLCNKA-204ENST00000464764 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
CLCNKA-204ENST00000464764 MT1AP04731 61 aa3.59□□□□□ -1.83
CLCNKA-204ENST00000464764 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
CLCNKA-204ENST00000464764 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
CLCNKA-204ENST00000464764 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
CLCNKA-204ENST00000464764 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
CLCNKA-204ENST00000464764 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
CLCNKA-204ENST00000464764 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
CLCNKA-204ENST00000464764 SPRR2EP22531 72 aa3.27□□□□□ -1.89
CLCNKA-204ENST00000464764 SPRR2BP35325 72 aa3.27□□□□□ -1.89
CLCNKA-204ENST00000464764 SPRR2AP35326 72 aa3.27□□□□□ -1.89
CLCNKA-204ENST00000464764 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
CLCNKA-204ENST00000464764 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
CLCNKA-204ENST00000464764 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
CLCNKA-204ENST00000464764 MT3P25713 68 aa3.15□□□□□ -1.91
CLCNKA-204ENST00000464764 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
CLCNKA-204ENST00000464764 SPRR2DP22532 72 aa3.1□□□□□ -1.91
CLCNKA-204ENST00000464764 NEBP20929 6669 aa3.03□□□□□ -1.92
CLCNKA-204ENST00000464764 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
CLCNKA-204ENST00000464764 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.94
CLCNKA-204ENST00000464764 MT4P47944 62 aa2.87□□□□□ -1.95
CLCNKA-204ENST00000464764 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.96
CLCNKA-204ENST00000464764 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
CLCNKA-204ENST00000464764 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
CLCNKA-204ENST00000464764 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
CLCNKA-204ENST00000464764 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
CLCNKA-204ENST00000464764 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
CLCNKA-204ENST00000464764 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
CLCNKA-204ENST00000464764 LCE4AQ5TA78 99 aa2.71□□□□□ -1.98
CLCNKA-204ENST00000464764 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CLCNKA-204ENST00000464764 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
CLCNKA-204ENST00000464764 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
CLCNKA-204ENST00000464764 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
CLCNKA-204ENST00000464764 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
CLCNKA-204ENST00000464764 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
CLCNKA-204ENST00000464764 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
CLCNKA-204ENST00000464764 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
CLCNKA-204ENST00000464764 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
CLCNKA-204ENST00000464764 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
CLCNKA-204ENST00000464764 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
CLCNKA-204ENST00000464764 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
CLCNKA-204ENST00000464764 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CLCNKA-204ENST00000464764 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
CLCNKA-204ENST00000464764 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
CLCNKA-204ENST00000464764 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
CLCNKA-204ENST00000464764 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
CLCNKA-204ENST00000464764 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
CLCNKA-204ENST00000464764 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
CLCNKA-204ENST00000464764 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
CLCNKA-204ENST00000464764 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
CLCNKA-204ENST00000464764 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
CLCNKA-204ENST00000464764 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
CLCNKA-204ENST00000464764 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 75.9 ms