RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 K7ERS5 55 aa5.75□□□□□ -1.49
SSNA1-204ENST00000464553 MT1MQ8N339 61 aa5.74□□□□□ -1.49
SSNA1-204ENST00000464553 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
SSNA1-204ENST00000464553 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
SSNA1-204ENST00000464553 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
SSNA1-204ENST00000464553 PSPHP1O15172 72 aa5.67□□□□□ -1.5
SSNA1-204ENST00000464553 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
SSNA1-204ENST00000464553 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
SSNA1-204ENST00000464553 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
SSNA1-204ENST00000464553 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
SSNA1-204ENST00000464553 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
SSNA1-204ENST00000464553 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
SSNA1-204ENST00000464553 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
SSNA1-204ENST00000464553 A6NED7 52 aa5.52□□□□□ -1.53
SSNA1-204ENST00000464553 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
SSNA1-204ENST00000464553 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
SSNA1-204ENST00000464553 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
SSNA1-204ENST00000464553 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
SSNA1-204ENST00000464553 MT4P47944 62 aa5.41□□□□□ -1.54
SSNA1-204ENST00000464553 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
SSNA1-204ENST00000464553 ROMO1P60602 79 aa5.32□□□□□ -1.56
SSNA1-204ENST00000464553 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
SSNA1-204ENST00000464553 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
SSNA1-204ENST00000464553 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
SSNA1-204ENST00000464553 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
SSNA1-204ENST00000464553 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
SSNA1-204ENST00000464553 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
SSNA1-204ENST00000464553 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
SSNA1-204ENST00000464553 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
SSNA1-204ENST00000464553 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
SSNA1-204ENST00000464553 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
SSNA1-204ENST00000464553 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
SSNA1-204ENST00000464553 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
SSNA1-204ENST00000464553 MT1AP04731 61 aa4.95□□□□□ -1.62
SSNA1-204ENST00000464553 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
SSNA1-204ENST00000464553 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
SSNA1-204ENST00000464553 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
SSNA1-204ENST00000464553 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
SSNA1-204ENST00000464553 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
SSNA1-204ENST00000464553 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
SSNA1-204ENST00000464553 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
SSNA1-204ENST00000464553 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
SSNA1-204ENST00000464553 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
SSNA1-204ENST00000464553 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
SSNA1-204ENST00000464553 MT3P25713 68 aa4.56□□□□□ -1.68
SSNA1-204ENST00000464553 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
SSNA1-204ENST00000464553 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
SSNA1-204ENST00000464553 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
SSNA1-204ENST00000464553 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
SSNA1-204ENST00000464553 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
SSNA1-204ENST00000464553 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
SSNA1-204ENST00000464553 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
SSNA1-204ENST00000464553 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
SSNA1-204ENST00000464553 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
SSNA1-204ENST00000464553 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
SSNA1-204ENST00000464553 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
SSNA1-204ENST00000464553 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
SSNA1-204ENST00000464553 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
SSNA1-204ENST00000464553 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
SSNA1-204ENST00000464553 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
SSNA1-204ENST00000464553 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
SSNA1-204ENST00000464553 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
SSNA1-204ENST00000464553 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
SSNA1-204ENST00000464553 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SSNA1-204ENST00000464553 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
SSNA1-204ENST00000464553 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
SSNA1-204ENST00000464553 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
SSNA1-204ENST00000464553 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SSNA1-204ENST00000464553 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
SSNA1-204ENST00000464553 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
SSNA1-204ENST00000464553 INE1O15225 51 aa2.98□□□□□ -1.93
SSNA1-204ENST00000464553 H3BS24 57 aa2.92□□□□□ -1.94
SSNA1-204ENST00000464553 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
SSNA1-204ENST00000464553 PRM1P04553 51 aa2.67□□□□□ -1.98
SSNA1-204ENST00000464553 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
SSNA1-204ENST00000464553 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
SSNA1-204ENST00000464553 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 174.7 ms