RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KMT2DO14686 5537 aa3.05□□□□□ -1.92
HPS4-208ENST00000464362 MT1LQ93083 61 aa3.02□□□□□ -1.93
HPS4-208ENST00000464362 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
HPS4-208ENST00000464362 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
HPS4-208ENST00000464362 MT1EP04732 61 aa2.99□□□□□ -1.93
HPS4-208ENST00000464362 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
HPS4-208ENST00000464362 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
HPS4-208ENST00000464362 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.94
HPS4-208ENST00000464362 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
HPS4-208ENST00000464362 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
HPS4-208ENST00000464362 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
HPS4-208ENST00000464362 SPRR2EP22531 72 aa2.91□□□□□ -1.94
HPS4-208ENST00000464362 SPRR2BP35325 72 aa2.91□□□□□ -1.94
HPS4-208ENST00000464362 SPRR2AP35326 72 aa2.91□□□□□ -1.94
HPS4-208ENST00000464362 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.94
HPS4-208ENST00000464362 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
HPS4-208ENST00000464362 MT1MQ8N339 61 aa2.86□□□□□ -1.95
HPS4-208ENST00000464362 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
HPS4-208ENST00000464362 KRTAP4-9Q9BYQ8 210 aa2.82□□□□□ -1.96
HPS4-208ENST00000464362 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
HPS4-208ENST00000464362 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
HPS4-208ENST00000464362 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
HPS4-208ENST00000464362 SPRR2DP22532 72 aa2.78□□□□□ -1.96
HPS4-208ENST00000464362 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
HPS4-208ENST00000464362 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
HPS4-208ENST00000464362 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
HPS4-208ENST00000464362 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
HPS4-208ENST00000464362 PRM1P04553 51 aa2.69□□□□□ -1.98
HPS4-208ENST00000464362 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
HPS4-208ENST00000464362 MT3P25713 68 aa2.65□□□□□ -1.98
HPS4-208ENST00000464362 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
HPS4-208ENST00000464362 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
HPS4-208ENST00000464362 MT4P47944 62 aa2.59□□□□□ -2
HPS4-208ENST00000464362 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.59□□□□□ -2
HPS4-208ENST00000464362 MT1AP04731 61 aa2.57□□□□□ -2
HPS4-208ENST00000464362 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
HPS4-208ENST00000464362 MDN1Q9NU22 5596 aa2.54□□□□□ -2
HPS4-208ENST00000464362 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
HPS4-208ENST00000464362 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
HPS4-208ENST00000464362 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
HPS4-208ENST00000464362 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
HPS4-208ENST00000464362 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
HPS4-208ENST00000464362 LCE1DQ5T752 114 aa2.48□□□□□ -2.01
HPS4-208ENST00000464362 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
HPS4-208ENST00000464362 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
HPS4-208ENST00000464362 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
HPS4-208ENST00000464362 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
HPS4-208ENST00000464362 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
HPS4-208ENST00000464362 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
HPS4-208ENST00000464362 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
HPS4-208ENST00000464362 NEBP20929 6669 aa2.24□□□□□ -2.05
HPS4-208ENST00000464362 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
HPS4-208ENST00000464362 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
HPS4-208ENST00000464362 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
HPS4-208ENST00000464362 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.06
HPS4-208ENST00000464362 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
HPS4-208ENST00000464362 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
HPS4-208ENST00000464362 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
HPS4-208ENST00000464362 KRTAP20-2Q3LI61 65 aa2.01□□□□□ -2.09
HPS4-208ENST00000464362 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
HPS4-208ENST00000464362 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
HPS4-208ENST00000464362 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
HPS4-208ENST00000464362 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
HPS4-208ENST00000464362 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
HPS4-208ENST00000464362 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
HPS4-208ENST00000464362 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
HPS4-208ENST00000464362 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
HPS4-208ENST00000464362 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
HPS4-208ENST00000464362 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
HPS4-208ENST00000464362 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
HPS4-208ENST00000464362 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
HPS4-208ENST00000464362 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
HPS4-208ENST00000464362 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
HPS4-208ENST00000464362 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
HPS4-208ENST00000464362 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
HPS4-208ENST00000464362 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
HPS4-208ENST00000464362 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
HPS4-208ENST00000464362 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 61.3 ms