RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
TUBGCP3-204ENST00000464139 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
TUBGCP3-204ENST00000464139 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
TUBGCP3-204ENST00000464139 INE1O15225 51 aa6.79□□□□□ -1.32
TUBGCP3-204ENST00000464139 KRTAP19-3Q7Z4W3 81 aa6.75□□□□□ -1.33
TUBGCP3-204ENST00000464139 KRTAP2-3P0C7H8 128 aa6.74□□□□□ -1.33
TUBGCP3-204ENST00000464139 KRTAP2-4Q9BYR9 128 aa6.74□□□□□ -1.33
TUBGCP3-204ENST00000464139 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
TUBGCP3-204ENST00000464139 MT1MQ8N339 61 aa6.72□□□□□ -1.33
TUBGCP3-204ENST00000464139 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
TUBGCP3-204ENST00000464139 MT1GP13640 62 aa6.7□□□□□ -1.34
TUBGCP3-204ENST00000464139 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
TUBGCP3-204ENST00000464139 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
TUBGCP3-204ENST00000464139 DSTQ03001 7570 aaKnown RBP6.64□□□□□ -1.35
TUBGCP3-204ENST00000464139 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
TUBGCP3-204ENST00000464139 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
TUBGCP3-204ENST00000464139 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
TUBGCP3-204ENST00000464139 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
TUBGCP3-204ENST00000464139 SPRR2EP22531 72 aa6.18□□□□□ -1.42
TUBGCP3-204ENST00000464139 SPRR2BP35325 72 aa6.18□□□□□ -1.42
TUBGCP3-204ENST00000464139 SPRR2AP35326 72 aa6.18□□□□□ -1.42
TUBGCP3-204ENST00000464139 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
TUBGCP3-204ENST00000464139 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.43
TUBGCP3-204ENST00000464139 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
TUBGCP3-204ENST00000464139 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
TUBGCP3-204ENST00000464139 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
TUBGCP3-204ENST00000464139 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
TUBGCP3-204ENST00000464139 MT1AP04731 61 aa5.99□□□□□ -1.45
TUBGCP3-204ENST00000464139 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
TUBGCP3-204ENST00000464139 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
TUBGCP3-204ENST00000464139 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
TUBGCP3-204ENST00000464139 SPRR2DP22532 72 aa5.92□□□□□ -1.46
TUBGCP3-204ENST00000464139 NEBP20929 6669 aa5.79□□□□□ -1.48
TUBGCP3-204ENST00000464139 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
TUBGCP3-204ENST00000464139 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
TUBGCP3-204ENST00000464139 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
TUBGCP3-204ENST00000464139 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
TUBGCP3-204ENST00000464139 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
TUBGCP3-204ENST00000464139 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
TUBGCP3-204ENST00000464139 MT3P25713 68 aa5.39□□□□□ -1.55
TUBGCP3-204ENST00000464139 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
TUBGCP3-204ENST00000464139 MT4P47944 62 aa5.25□□□□□ -1.57
TUBGCP3-204ENST00000464139 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
TUBGCP3-204ENST00000464139 PRM1P04553 51 aa5.22□□□□□ -1.57
TUBGCP3-204ENST00000464139 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
TUBGCP3-204ENST00000464139 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
TUBGCP3-204ENST00000464139 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
TUBGCP3-204ENST00000464139 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
TUBGCP3-204ENST00000464139 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
TUBGCP3-204ENST00000464139 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
TUBGCP3-204ENST00000464139 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
TUBGCP3-204ENST00000464139 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
TUBGCP3-204ENST00000464139 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
TUBGCP3-204ENST00000464139 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
TUBGCP3-204ENST00000464139 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
TUBGCP3-204ENST00000464139 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
TUBGCP3-204ENST00000464139 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
TUBGCP3-204ENST00000464139 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
TUBGCP3-204ENST00000464139 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
TUBGCP3-204ENST00000464139 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
TUBGCP3-204ENST00000464139 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
TUBGCP3-204ENST00000464139 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
TUBGCP3-204ENST00000464139 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
TUBGCP3-204ENST00000464139 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
TUBGCP3-204ENST00000464139 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
TUBGCP3-204ENST00000464139 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
TUBGCP3-204ENST00000464139 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
TUBGCP3-204ENST00000464139 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
TUBGCP3-204ENST00000464139 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
TUBGCP3-204ENST00000464139 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
TUBGCP3-204ENST00000464139 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
TUBGCP3-204ENST00000464139 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
TUBGCP3-204ENST00000464139 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
TUBGCP3-204ENST00000464139 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
TUBGCP3-204ENST00000464139 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
TUBGCP3-204ENST00000464139 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
TUBGCP3-204ENST00000464139 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 86.7 ms