RNA–Protein interactions for RNA: ENST00000463194.1

RFC2-203, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-203ENST00000463194 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
RFC2-203ENST00000463194 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
RFC2-203ENST00000463194 Q1T7F1 81 aa6.98□□□□□ -1.29
RFC2-203ENST00000463194 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
RFC2-203ENST00000463194 MT1LQ93083 61 aa6.93□□□□□ -1.3
RFC2-203ENST00000463194 PSPHP1O15172 72 aa6.91□□□□□ -1.3
RFC2-203ENST00000463194 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
RFC2-203ENST00000463194 MT1MQ8N339 61 aa6.87□□□□□ -1.31
RFC2-203ENST00000463194 K7ERS5 55 aa6.86□□□□□ -1.31
RFC2-203ENST00000463194 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
RFC2-203ENST00000463194 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
RFC2-203ENST00000463194 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
RFC2-203ENST00000463194 RPS28P62857 69 aaKnown RBP6.74□□□□□ -1.33
RFC2-203ENST00000463194 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
RFC2-203ENST00000463194 A6NED7 52 aa6.7□□□□□ -1.34
RFC2-203ENST00000463194 PCP4P48539 62 aa6.67□□□□□ -1.34
RFC2-203ENST00000463194 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
RFC2-203ENST00000463194 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
RFC2-203ENST00000463194 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
RFC2-203ENST00000463194 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
RFC2-203ENST00000463194 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
RFC2-203ENST00000463194 KRTAP5-4Q6L8H1 288 aa6.51□□□□□ -1.37
RFC2-203ENST00000463194 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
RFC2-203ENST00000463194 KRTAP4-2Q9BYR5 136 aa6.46□□□□□ -1.38
RFC2-203ENST00000463194 MT4P47944 62 aa6.44□□□□□ -1.38
RFC2-203ENST00000463194 ROMO1P60602 79 aa6.42□□□□□ -1.38
RFC2-203ENST00000463194 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
RFC2-203ENST00000463194 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.4
RFC2-203ENST00000463194 GPR98Q8WXG9 6306 aa6.3□□□□□ -1.4
RFC2-203ENST00000463194 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
RFC2-203ENST00000463194 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
RFC2-203ENST00000463194 KRTAP4-11Q9BYQ6 195 aa6.25□□□□□ -1.41
RFC2-203ENST00000463194 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
RFC2-203ENST00000463194 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
RFC2-203ENST00000463194 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
RFC2-203ENST00000463194 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
RFC2-203ENST00000463194 KRTAP5-10Q6L8G5 202 aa6.01□□□□□ -1.45
RFC2-203ENST00000463194 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
RFC2-203ENST00000463194 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
RFC2-203ENST00000463194 MT1AP04731 61 aa5.91□□□□□ -1.46
RFC2-203ENST00000463194 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
RFC2-203ENST00000463194 KRTAP6-1Q3LI64 71 aa5.84□□□□□ -1.47
RFC2-203ENST00000463194 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
RFC2-203ENST00000463194 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
RFC2-203ENST00000463194 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
RFC2-203ENST00000463194 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
RFC2-203ENST00000463194 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
RFC2-203ENST00000463194 MT3P25713 68 aa5.41□□□□□ -1.54
RFC2-203ENST00000463194 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
RFC2-203ENST00000463194 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
RFC2-203ENST00000463194 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
RFC2-203ENST00000463194 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
RFC2-203ENST00000463194 H3BS24 57 aa5.15□□□□□ -1.59
RFC2-203ENST00000463194 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
RFC2-203ENST00000463194 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
RFC2-203ENST00000463194 MUC5BQ9HC84 5762 aaPredicted RBP4.97□□□□□ -1.61
RFC2-203ENST00000463194 MUC5ACP98088 5654 aa4.96□□□□□ -1.61
RFC2-203ENST00000463194 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
RFC2-203ENST00000463194 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
RFC2-203ENST00000463194 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
RFC2-203ENST00000463194 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
RFC2-203ENST00000463194 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
RFC2-203ENST00000463194 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
RFC2-203ENST00000463194 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
RFC2-203ENST00000463194 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
RFC2-203ENST00000463194 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
RFC2-203ENST00000463194 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
RFC2-203ENST00000463194 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
RFC2-203ENST00000463194 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
RFC2-203ENST00000463194 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
RFC2-203ENST00000463194 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
RFC2-203ENST00000463194 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
RFC2-203ENST00000463194 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
RFC2-203ENST00000463194 PRM1P04553 51 aa3.26□□□□□ -1.89
RFC2-203ENST00000463194 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
RFC2-203ENST00000463194 INE1O15225 51 aa2.97□□□□□ -1.93
RFC2-203ENST00000463194 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
RFC2-203ENST00000463194 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 145.5 ms