RNA–Protein interactions for RNA: ENST00000463006.5

CNOT10-208, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 692 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-208ENST00000463006 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
CNOT10-208ENST00000463006 CSMD2Q7Z408 3487 aa1.07□□□□□ -2.24
CNOT10-208ENST00000463006 HERC2O95714 4834 aa1.07□□□□□ -2.24
CNOT10-208ENST00000463006 ZNF469Q96JG9 3925 aaPredicted RBP1.07□□□□□ -2.24
CNOT10-208ENST00000463006 RYR1P21817 5038 aa1.07□□□□□ -2.24
CNOT10-208ENST00000463006 MGAM2Q2M2H8 2515 aa1.07□□□□□ -2.24
CNOT10-208ENST00000463006 LRP1Q07954 4544 aaKnown RBP1.07□□□□□ -2.24
CNOT10-208ENST00000463006 DYNC1H1Q14204 4646 aaKnown RBP1.06□□□□□ -2.24
CNOT10-208ENST00000463006 RYR2Q92736 4967 aa1.06□□□□□ -2.24
CNOT10-208ENST00000463006 CUBNO60494 3623 aa1.05□□□□□ -2.24
CNOT10-208ENST00000463006 VPS13CQ709C8 3753 aa1.05□□□□□ -2.24
CNOT10-208ENST00000463006 SVEP1Q4LDE5 3571 aa1.04□□□□□ -2.24
CNOT10-208ENST00000463006 STARD9Q9P2P6 4700 aa1.04□□□□□ -2.24
CNOT10-208ENST00000463006 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
CNOT10-208ENST00000463006 SPRR2GQ9BYE4 73 aa1.03□□□□□ -2.24
CNOT10-208ENST00000463006 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
CNOT10-208ENST00000463006 TNXBP22105 4242 aa1.01□□□□□ -2.25
CNOT10-208ENST00000463006 MT1AP04731 61 aa1.01□□□□□ -2.25
CNOT10-208ENST00000463006 PRM1P04553 51 aa1□□□□□ -2.25
CNOT10-208ENST00000463006 TENM3Q9P273 2699 aa1□□□□□ -2.25
CNOT10-208ENST00000463006 ABCA13Q86UQ4 5058 aa0.99□□□□□ -2.25
CNOT10-208ENST00000463006 LPAP08519 4548 aa0.99□□□□□ -2.25
CNOT10-208ENST00000463006 HERC1Q15751 4861 aa0.99□□□□□ -2.25
CNOT10-208ENST00000463006 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
CNOT10-208ENST00000463006 KIAA1109Q2LD37 5005 aa0.98□□□□□ -2.25
CNOT10-208ENST00000463006 PKHD1P08F94 4074 aa0.98□□□□□ -2.25
CNOT10-208ENST00000463006 MUC17Q685J3 4493 aa0.96□□□□□ -2.26
CNOT10-208ENST00000463006 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
CNOT10-208ENST00000463006 FAT1Q14517 4588 aa0.94□□□□□ -2.26
CNOT10-208ENST00000463006 MT1EP04732 61 aa0.94□□□□□ -2.26
CNOT10-208ENST00000463006 SPRR2BP35325 72 aa0.94□□□□□ -2.26
CNOT10-208ENST00000463006 SPRR2AP35326 72 aa0.94□□□□□ -2.26
CNOT10-208ENST00000463006 LRP1BQ9NZR2 4599 aa0.93□□□□□ -2.26
CNOT10-208ENST00000463006 KRTAP19-8Q3LI54 63 aa0.92□□□□□ -2.26
CNOT10-208ENST00000463006 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
CNOT10-208ENST00000463006 SPRR2DP22532 72 aa0.91□□□□□ -2.26
CNOT10-208ENST00000463006 HMCN2Q8NDA2 5059 aa0.9□□□□□ -2.26
CNOT10-208ENST00000463006 MT1LQ93083 61 aa0.9□□□□□ -2.27
CNOT10-208ENST00000463006 MUC2Q02817 5179 aa0.9□□□□□ -2.27
CNOT10-208ENST00000463006 SPRR2FQ96RM1 72 aa0.89□□□□□ -2.27
CNOT10-208ENST00000463006 MT1XP80297 61 aa0.87□□□□□ -2.27
CNOT10-208ENST00000463006 RNF213Q63HN8 5207 aa0.87□□□□□ -2.27
CNOT10-208ENST00000463006 FAT4Q6V0I7 4981 aa0.87□□□□□ -2.27
CNOT10-208ENST00000463006 LRP2P98164 4655 aa0.86□□□□□ -2.27
CNOT10-208ENST00000463006 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
CNOT10-208ENST00000463006 SPRR2EP22531 72 aa0.85□□□□□ -2.27
CNOT10-208ENST00000463006 MT1HP80294 61 aa0.85□□□□□ -2.27
CNOT10-208ENST00000463006 KRTAP19-2Q3LHN2 52 aa0.85□□□□□ -2.27
CNOT10-208ENST00000463006 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
CNOT10-208ENST00000463006 GPR98Q8WXG9 6306 aa0.83□□□□□ -2.28
CNOT10-208ENST00000463006 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
CNOT10-208ENST00000463006 MT1BP07438 61 aa0.78□□□□□ -2.28
CNOT10-208ENST00000463006 MT1HL1P0DM35 61 aa0.77□□□□□ -2.29
CNOT10-208ENST00000463006 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
CNOT10-208ENST00000463006 KRTAP19-7Q3SYF9 63 aa0.76□□□□□ -2.29
CNOT10-208ENST00000463006 FSIP2Q5CZC0 6907 aa0.74□□□□□ -2.29
CNOT10-208ENST00000463006 SSPOA2VEC9 5147 aa0.74□□□□□ -2.29
CNOT10-208ENST00000463006 MT1GP13640 62 aa0.73□□□□□ -2.29
CNOT10-208ENST00000463006 MT2AP02795 61 aa0.72□□□□□ -2.29
CNOT10-208ENST00000463006 MT1MQ8N339 61 aa0.71□□□□□ -2.3
CNOT10-208ENST00000463006 MACF1Q9UPN3 7388 aaKnown RBP0.71□□□□□ -2.3
CNOT10-208ENST00000463006 USH2AO75445 5202 aa0.71□□□□□ -2.3
CNOT10-208ENST00000463006 NEBP20929 6669 aa0.68□□□□□ -2.3
CNOT10-208ENST00000463006 SYNE2Q8WXH0 6885 aaKnown RBP0.68□□□□□ -2.3
CNOT10-208ENST00000463006 MUC12Q9UKN1 5478 aa0.68□□□□□ -2.3
CNOT10-208ENST00000463006 MT1FP04733 61 aa0.67□□□□□ -2.3
CNOT10-208ENST00000463006 KMT2DO14686 5537 aa0.65□□□□□ -2.31
CNOT10-208ENST00000463006 KRTAP20-1Q3LI63 56 aa0.64□□□□□ -2.31
CNOT10-208ENST00000463006 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
CNOT10-208ENST00000463006 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
CNOT10-208ENST00000463006 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
CNOT10-208ENST00000463006 MDN1Q9NU22 5596 aa0.61□□□□□ -2.31
CNOT10-208ENST00000463006 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
CNOT10-208ENST00000463006 MUC5ACP98088 5654 aa0.53□□□□□ -2.33
CNOT10-208ENST00000463006 KRTAP19-6Q3LI70 58 aa0.51□□□□□ -2.33
CNOT10-208ENST00000463006 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
CNOT10-208ENST00000463006 MT4P47944 62 aa0.43□□□□□ -2.34
CNOT10-208ENST00000463006 KRTAP20-2Q3LI61 65 aa0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 99.1 ms