RNA–Protein interactions for RNA: ENST00000463006.5

CNOT10-208, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 692 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-208ENST00000463006 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
CNOT10-208ENST00000463006 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
CNOT10-208ENST00000463006 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
CNOT10-208ENST00000463006 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
CNOT10-208ENST00000463006 FOXD1Q16676 465 aa19.41■□□□□ 0.7
CNOT10-208ENST00000463006 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
CNOT10-208ENST00000463006 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
CNOT10-208ENST00000463006 ADRA2BP18089 450 aa18.35■□□□□ 0.53
CNOT10-208ENST00000463006 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
CNOT10-208ENST00000463006 MSH5O43196 834 aa17.98■□□□□ 0.47
CNOT10-208ENST00000463006 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
CNOT10-208ENST00000463006 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
CNOT10-208ENST00000463006 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
CNOT10-208ENST00000463006 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
CNOT10-208ENST00000463006 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
CNOT10-208ENST00000463006 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
CNOT10-208ENST00000463006 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
CNOT10-208ENST00000463006 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
CNOT10-208ENST00000463006 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
CNOT10-208ENST00000463006 NPM3O75607 178 aaKnown RBP15.95■□□□□ 0.14
CNOT10-208ENST00000463006 KCNA4P22459 653 aa15.94■□□□□ 0.14
CNOT10-208ENST00000463006 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
CNOT10-208ENST00000463006 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
CNOT10-208ENST00000463006 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
CNOT10-208ENST00000463006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
CNOT10-208ENST00000463006 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
CNOT10-208ENST00000463006 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
CNOT10-208ENST00000463006 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
CNOT10-208ENST00000463006 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
CNOT10-208ENST00000463006 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
CNOT10-208ENST00000463006 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
CNOT10-208ENST00000463006 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
CNOT10-208ENST00000463006 ZBTB22O15209 634 aa14.71□□□□□ -0.05
CNOT10-208ENST00000463006 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
CNOT10-208ENST00000463006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
CNOT10-208ENST00000463006 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
CNOT10-208ENST00000463006 CAPN15O75808 1086 aa14.64□□□□□ -0.07
CNOT10-208ENST00000463006 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
CNOT10-208ENST00000463006 APLP2Q06481 763 aa14.6□□□□□ -0.07
CNOT10-208ENST00000463006 DSG3P32926 999 aa14.55□□□□□ -0.08
CNOT10-208ENST00000463006 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
CNOT10-208ENST00000463006 TRHP20396 242 aaPredicted RBP14.49□□□□□ -0.09
CNOT10-208ENST00000463006 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
CNOT10-208ENST00000463006 ABCB7O75027 752 aa14.36□□□□□ -0.11
CNOT10-208ENST00000463006 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
CNOT10-208ENST00000463006 ATXN8OSP0DMR3 200 aa14.27□□□□□ -0.13
CNOT10-208ENST00000463006 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
CNOT10-208ENST00000463006 POLA2Q14181 598 aa14.21□□□□□ -0.13
CNOT10-208ENST00000463006 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
CNOT10-208ENST00000463006 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
CNOT10-208ENST00000463006 MKRN4PQ13434 485 aaPredicted RBP13.76□□□□□ -0.21
CNOT10-208ENST00000463006 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
CNOT10-208ENST00000463006 POTEHQ6S545 545 aa13.75□□□□□ -0.21
CNOT10-208ENST00000463006 FBLN2P98095 1184 aa13.71□□□□□ -0.21
CNOT10-208ENST00000463006 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
CNOT10-208ENST00000463006 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
CNOT10-208ENST00000463006 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
CNOT10-208ENST00000463006 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
CNOT10-208ENST00000463006 REM2Q8IYK8 340 aaPredicted RBP13.48□□□□□ -0.25
CNOT10-208ENST00000463006 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
CNOT10-208ENST00000463006 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
CNOT10-208ENST00000463006 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
CNOT10-208ENST00000463006 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
CNOT10-208ENST00000463006 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
CNOT10-208ENST00000463006 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
CNOT10-208ENST00000463006 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
CNOT10-208ENST00000463006 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
CNOT10-208ENST00000463006 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNOT10-208ENST00000463006 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
CNOT10-208ENST00000463006 PROM2Q8N271 834 aa13.04□□□□□ -0.32
CNOT10-208ENST00000463006 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
CNOT10-208ENST00000463006 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
CNOT10-208ENST00000463006 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
CNOT10-208ENST00000463006 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
CNOT10-208ENST00000463006 FKBP8Q14318 412 aa12.9□□□□□ -0.34
CNOT10-208ENST00000463006 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
CNOT10-208ENST00000463006 HAX1O00165 279 aa12.78□□□□□ -0.36
CNOT10-208ENST00000463006 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
CNOT10-208ENST00000463006 EVX2Q03828 476 aa12.74□□□□□ -0.37
CNOT10-208ENST00000463006 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
CNOT10-208ENST00000463006 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
CNOT10-208ENST00000463006 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
CNOT10-208ENST00000463006 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
CNOT10-208ENST00000463006 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
CNOT10-208ENST00000463006 MIER1Q8N108 512 aa12.52□□□□□ -0.41
CNOT10-208ENST00000463006 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
CNOT10-208ENST00000463006 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
CNOT10-208ENST00000463006 GABBR2O75899 941 aa12.44□□□□□ -0.42
CNOT10-208ENST00000463006 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
CNOT10-208ENST00000463006 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
CNOT10-208ENST00000463006 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
CNOT10-208ENST00000463006 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
CNOT10-208ENST00000463006 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
CNOT10-208ENST00000463006 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
CNOT10-208ENST00000463006 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
CNOT10-208ENST00000463006 CLCN6P51797 869 aa12.33□□□□□ -0.44
CNOT10-208ENST00000463006 NUBP1P53384 320 aa12.33□□□□□ -0.44
CNOT10-208ENST00000463006 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
CNOT10-208ENST00000463006 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
CNOT10-208ENST00000463006 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms