RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
ACTB-207ENST00000462494 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
ACTB-207ENST00000462494 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
ACTB-207ENST00000462494 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
ACTB-207ENST00000462494 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
ACTB-207ENST00000462494 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
ACTB-207ENST00000462494 MT1GP13640 62 aa5.53□□□□□ -1.52
ACTB-207ENST00000462494 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
ACTB-207ENST00000462494 MT1MQ8N339 61 aa5.51□□□□□ -1.53
ACTB-207ENST00000462494 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
ACTB-207ENST00000462494 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
ACTB-207ENST00000462494 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
ACTB-207ENST00000462494 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
ACTB-207ENST00000462494 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
ACTB-207ENST00000462494 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
ACTB-207ENST00000462494 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
ACTB-207ENST00000462494 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
ACTB-207ENST00000462494 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
ACTB-207ENST00000462494 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
ACTB-207ENST00000462494 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
ACTB-207ENST00000462494 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
ACTB-207ENST00000462494 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
ACTB-207ENST00000462494 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
ACTB-207ENST00000462494 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
ACTB-207ENST00000462494 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
ACTB-207ENST00000462494 MT1AP04731 61 aa4.92□□□□□ -1.62
ACTB-207ENST00000462494 SPRR2EP22531 72 aa4.91□□□□□ -1.62
ACTB-207ENST00000462494 SPRR2BP35325 72 aa4.91□□□□□ -1.62
ACTB-207ENST00000462494 SPRR2AP35326 72 aa4.91□□□□□ -1.62
ACTB-207ENST00000462494 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
ACTB-207ENST00000462494 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
ACTB-207ENST00000462494 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
ACTB-207ENST00000462494 SPRR2DP22532 72 aa4.69□□□□□ -1.66
ACTB-207ENST00000462494 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.66
ACTB-207ENST00000462494 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
ACTB-207ENST00000462494 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
ACTB-207ENST00000462494 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
ACTB-207ENST00000462494 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
ACTB-207ENST00000462494 PRM1P04553 51 aa4.49□□□□□ -1.69
ACTB-207ENST00000462494 MT3P25713 68 aa4.45□□□□□ -1.7
ACTB-207ENST00000462494 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
ACTB-207ENST00000462494 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
ACTB-207ENST00000462494 NEBP20929 6669 aa4.21□□□□□ -1.74
ACTB-207ENST00000462494 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
ACTB-207ENST00000462494 MT4P47944 62 aa4.17□□□□□ -1.74
ACTB-207ENST00000462494 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
ACTB-207ENST00000462494 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
ACTB-207ENST00000462494 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
ACTB-207ENST00000462494 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
ACTB-207ENST00000462494 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
ACTB-207ENST00000462494 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
ACTB-207ENST00000462494 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
ACTB-207ENST00000462494 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
ACTB-207ENST00000462494 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
ACTB-207ENST00000462494 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
ACTB-207ENST00000462494 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
ACTB-207ENST00000462494 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
ACTB-207ENST00000462494 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
ACTB-207ENST00000462494 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
ACTB-207ENST00000462494 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
ACTB-207ENST00000462494 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
ACTB-207ENST00000462494 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
ACTB-207ENST00000462494 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
ACTB-207ENST00000462494 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
ACTB-207ENST00000462494 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
ACTB-207ENST00000462494 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
ACTB-207ENST00000462494 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
ACTB-207ENST00000462494 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
ACTB-207ENST00000462494 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
ACTB-207ENST00000462494 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
ACTB-207ENST00000462494 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
ACTB-207ENST00000462494 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
ACTB-207ENST00000462494 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
ACTB-207ENST00000462494 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
ACTB-207ENST00000462494 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
ACTB-207ENST00000462494 PHGR1C9JFL3 82 aa2.54□□□□□ -2
ACTB-207ENST00000462494 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
ACTB-207ENST00000462494 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 81.9 ms