RNA–Protein interactions for RNA: ENST00000461972.5

FAM228B-202, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 2

Gene FAM228B, Length 2,616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-202ENST00000461972 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
FAM228B-202ENST00000461972 DSTQ03001 7570 aaKnown RBP6.76□□□□□ -1.33
FAM228B-202ENST00000461972 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
FAM228B-202ENST00000461972 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.33
FAM228B-202ENST00000461972 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.33
FAM228B-202ENST00000461972 SPRR2FQ96RM1 72 aa6.67□□□□□ -1.34
FAM228B-202ENST00000461972 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
FAM228B-202ENST00000461972 MT1MQ8N339 61 aa6.64□□□□□ -1.35
FAM228B-202ENST00000461972 MT1GP13640 62 aa6.61□□□□□ -1.35
FAM228B-202ENST00000461972 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.36
FAM228B-202ENST00000461972 MDN1Q9NU22 5596 aa6.57□□□□□ -1.36
FAM228B-202ENST00000461972 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
FAM228B-202ENST00000461972 LCE5AQ5TCM9 118 aa6.5□□□□□ -1.37
FAM228B-202ENST00000461972 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
FAM228B-202ENST00000461972 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
FAM228B-202ENST00000461972 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
FAM228B-202ENST00000461972 INE1O15225 51 aa6.46□□□□□ -1.38
FAM228B-202ENST00000461972 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
FAM228B-202ENST00000461972 KRTAP5-9P26371 169 aa6.24□□□□□ -1.41
FAM228B-202ENST00000461972 SPRR2EP22531 72 aa6.14□□□□□ -1.43
FAM228B-202ENST00000461972 SPRR2BP35325 72 aa6.14□□□□□ -1.43
FAM228B-202ENST00000461972 SPRR2AP35326 72 aa6.14□□□□□ -1.43
FAM228B-202ENST00000461972 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
FAM228B-202ENST00000461972 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
FAM228B-202ENST00000461972 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
FAM228B-202ENST00000461972 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
FAM228B-202ENST00000461972 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
FAM228B-202ENST00000461972 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
FAM228B-202ENST00000461972 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
FAM228B-202ENST00000461972 SPRR2DP22532 72 aa5.87□□□□□ -1.47
FAM228B-202ENST00000461972 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
FAM228B-202ENST00000461972 MT1AP04731 61 aa5.85□□□□□ -1.47
FAM228B-202ENST00000461972 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
FAM228B-202ENST00000461972 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
FAM228B-202ENST00000461972 NEBP20929 6669 aa5.6□□□□□ -1.51
FAM228B-202ENST00000461972 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
FAM228B-202ENST00000461972 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
FAM228B-202ENST00000461972 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
FAM228B-202ENST00000461972 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
FAM228B-202ENST00000461972 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.55
FAM228B-202ENST00000461972 KRTAP5-4Q6L8H1 288 aa5.33□□□□□ -1.56
FAM228B-202ENST00000461972 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
FAM228B-202ENST00000461972 MT4P47944 62 aa5.27□□□□□ -1.57
FAM228B-202ENST00000461972 MT3P25713 68 aa5.26□□□□□ -1.57
FAM228B-202ENST00000461972 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
FAM228B-202ENST00000461972 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
FAM228B-202ENST00000461972 PRM1P04553 51 aa5.02□□□□□ -1.61
FAM228B-202ENST00000461972 LCE4AQ5TA78 99 aa5□□□□□ -1.61
FAM228B-202ENST00000461972 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
FAM228B-202ENST00000461972 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
FAM228B-202ENST00000461972 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
FAM228B-202ENST00000461972 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
FAM228B-202ENST00000461972 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
FAM228B-202ENST00000461972 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
FAM228B-202ENST00000461972 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
FAM228B-202ENST00000461972 LCE1EQ5T753 118 aa4.34□□□□□ -1.72
FAM228B-202ENST00000461972 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
FAM228B-202ENST00000461972 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
FAM228B-202ENST00000461972 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
FAM228B-202ENST00000461972 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
FAM228B-202ENST00000461972 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.75
FAM228B-202ENST00000461972 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
FAM228B-202ENST00000461972 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
FAM228B-202ENST00000461972 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
FAM228B-202ENST00000461972 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
FAM228B-202ENST00000461972 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
FAM228B-202ENST00000461972 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
FAM228B-202ENST00000461972 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
FAM228B-202ENST00000461972 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
FAM228B-202ENST00000461972 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
FAM228B-202ENST00000461972 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
FAM228B-202ENST00000461972 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
FAM228B-202ENST00000461972 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
FAM228B-202ENST00000461972 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
FAM228B-202ENST00000461972 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
FAM228B-202ENST00000461972 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
FAM228B-202ENST00000461972 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
FAM228B-202ENST00000461972 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 44.9 ms