RNA–Protein interactions for RNA: ENST00000461064.5

FAM53A-202, Transcript of family with sequence similarity 53 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM53A, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-202ENST00000461064 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
FAM53A-202ENST00000461064 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
FAM53A-202ENST00000461064 KRTAP2-1Q9BYU5 128 aa6.75□□□□□ -1.33
FAM53A-202ENST00000461064 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
FAM53A-202ENST00000461064 MACF1Q9UPN3 7388 aaKnown RBP6.55□□□□□ -1.36
FAM53A-202ENST00000461064 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.36
FAM53A-202ENST00000461064 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
FAM53A-202ENST00000461064 MT1GP13640 62 aa6.51□□□□□ -1.37
FAM53A-202ENST00000461064 MT1MQ8N339 61 aa6.5□□□□□ -1.37
FAM53A-202ENST00000461064 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
FAM53A-202ENST00000461064 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
FAM53A-202ENST00000461064 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
FAM53A-202ENST00000461064 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
FAM53A-202ENST00000461064 SYNE2Q8WXH0 6885 aaKnown RBP6.38□□□□□ -1.39
FAM53A-202ENST00000461064 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
FAM53A-202ENST00000461064 KRTAP5-9P26371 169 aa6.24□□□□□ -1.41
FAM53A-202ENST00000461064 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
FAM53A-202ENST00000461064 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
FAM53A-202ENST00000461064 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.43
FAM53A-202ENST00000461064 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
FAM53A-202ENST00000461064 SPRR2EP22531 72 aa6.03□□□□□ -1.44
FAM53A-202ENST00000461064 SPRR2BP35325 72 aa6.03□□□□□ -1.44
FAM53A-202ENST00000461064 SPRR2AP35326 72 aa6.03□□□□□ -1.44
FAM53A-202ENST00000461064 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
FAM53A-202ENST00000461064 KRTAP6-3Q3LI67 103 aa5.93□□□□□ -1.46
FAM53A-202ENST00000461064 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
FAM53A-202ENST00000461064 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
FAM53A-202ENST00000461064 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
FAM53A-202ENST00000461064 MT1AP04731 61 aa5.84□□□□□ -1.47
FAM53A-202ENST00000461064 SPRR2DP22532 72 aa5.79□□□□□ -1.48
FAM53A-202ENST00000461064 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
FAM53A-202ENST00000461064 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
FAM53A-202ENST00000461064 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
FAM53A-202ENST00000461064 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
FAM53A-202ENST00000461064 NEBP20929 6669 aa5.57□□□□□ -1.52
FAM53A-202ENST00000461064 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
FAM53A-202ENST00000461064 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
FAM53A-202ENST00000461064 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
FAM53A-202ENST00000461064 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
FAM53A-202ENST00000461064 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
FAM53A-202ENST00000461064 MT3P25713 68 aa5.26□□□□□ -1.57
FAM53A-202ENST00000461064 PRM1P04553 51 aa5.23□□□□□ -1.57
FAM53A-202ENST00000461064 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
FAM53A-202ENST00000461064 MT4P47944 62 aa5.08□□□□□ -1.6
FAM53A-202ENST00000461064 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
FAM53A-202ENST00000461064 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
FAM53A-202ENST00000461064 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
FAM53A-202ENST00000461064 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
FAM53A-202ENST00000461064 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
FAM53A-202ENST00000461064 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
FAM53A-202ENST00000461064 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
FAM53A-202ENST00000461064 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
FAM53A-202ENST00000461064 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
FAM53A-202ENST00000461064 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
FAM53A-202ENST00000461064 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
FAM53A-202ENST00000461064 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
FAM53A-202ENST00000461064 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
FAM53A-202ENST00000461064 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
FAM53A-202ENST00000461064 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.73
FAM53A-202ENST00000461064 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
FAM53A-202ENST00000461064 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
FAM53A-202ENST00000461064 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
FAM53A-202ENST00000461064 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
FAM53A-202ENST00000461064 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
FAM53A-202ENST00000461064 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
FAM53A-202ENST00000461064 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
FAM53A-202ENST00000461064 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
FAM53A-202ENST00000461064 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
FAM53A-202ENST00000461064 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
FAM53A-202ENST00000461064 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
FAM53A-202ENST00000461064 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
FAM53A-202ENST00000461064 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
FAM53A-202ENST00000461064 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
FAM53A-202ENST00000461064 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
FAM53A-202ENST00000461064 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
FAM53A-202ENST00000461064 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
FAM53A-202ENST00000461064 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 7.8 ms