RNA–Protein interactions for RNA: ENST00000460766.5

IMP4-208, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 1 (best)

Gene IMP4, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-208ENST00000460766 KRTAP2-1Q9BYU5 128 aa6.9□□□□□ -1.3
IMP4-208ENST00000460766 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
IMP4-208ENST00000460766 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
IMP4-208ENST00000460766 KRTAP4-3Q9BYR4 195 aa6.75□□□□□ -1.33
IMP4-208ENST00000460766 MUC12Q9UKN1 5478 aa6.72□□□□□ -1.33
IMP4-208ENST00000460766 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
IMP4-208ENST00000460766 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
IMP4-208ENST00000460766 MT1GP13640 62 aa6.67□□□□□ -1.34
IMP4-208ENST00000460766 MT1MQ8N339 61 aa6.66□□□□□ -1.34
IMP4-208ENST00000460766 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
IMP4-208ENST00000460766 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
IMP4-208ENST00000460766 DSTQ03001 7570 aaKnown RBP6.46□□□□□ -1.37
IMP4-208ENST00000460766 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
IMP4-208ENST00000460766 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
IMP4-208ENST00000460766 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
IMP4-208ENST00000460766 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
IMP4-208ENST00000460766 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
IMP4-208ENST00000460766 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
IMP4-208ENST00000460766 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
IMP4-208ENST00000460766 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
IMP4-208ENST00000460766 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
IMP4-208ENST00000460766 KRTAP5-9P26371 169 aa6□□□□□ -1.45
IMP4-208ENST00000460766 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
IMP4-208ENST00000460766 MT1AP04731 61 aa5.96□□□□□ -1.45
IMP4-208ENST00000460766 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
IMP4-208ENST00000460766 SPRR2EP22531 72 aa5.93□□□□□ -1.46
IMP4-208ENST00000460766 SPRR2BP35325 72 aa5.93□□□□□ -1.46
IMP4-208ENST00000460766 SPRR2AP35326 72 aa5.93□□□□□ -1.46
IMP4-208ENST00000460766 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
IMP4-208ENST00000460766 LCE3DQ9BYE3 92 aa5.77□□□□□ -1.49
IMP4-208ENST00000460766 LCE3EQ5T5B0 92 aa5.68□□□□□ -1.5
IMP4-208ENST00000460766 SPRR2DP22532 72 aa5.67□□□□□ -1.5
IMP4-208ENST00000460766 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
IMP4-208ENST00000460766 KRTAP6-3Q3LI67 103 aa5.5□□□□□ -1.53
IMP4-208ENST00000460766 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
IMP4-208ENST00000460766 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
IMP4-208ENST00000460766 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
IMP4-208ENST00000460766 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
IMP4-208ENST00000460766 PRM1P04553 51 aa5.41□□□□□ -1.54
IMP4-208ENST00000460766 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
IMP4-208ENST00000460766 MT3P25713 68 aa5.38□□□□□ -1.55
IMP4-208ENST00000460766 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
IMP4-208ENST00000460766 NEBP20929 6669 aa5.11□□□□□ -1.59
IMP4-208ENST00000460766 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
IMP4-208ENST00000460766 MT4P47944 62 aa5.02□□□□□ -1.61
IMP4-208ENST00000460766 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.62
IMP4-208ENST00000460766 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
IMP4-208ENST00000460766 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
IMP4-208ENST00000460766 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
IMP4-208ENST00000460766 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
IMP4-208ENST00000460766 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
IMP4-208ENST00000460766 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
IMP4-208ENST00000460766 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
IMP4-208ENST00000460766 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
IMP4-208ENST00000460766 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
IMP4-208ENST00000460766 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
IMP4-208ENST00000460766 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
IMP4-208ENST00000460766 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
IMP4-208ENST00000460766 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
IMP4-208ENST00000460766 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
IMP4-208ENST00000460766 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
IMP4-208ENST00000460766 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
IMP4-208ENST00000460766 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
IMP4-208ENST00000460766 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
IMP4-208ENST00000460766 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
IMP4-208ENST00000460766 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
IMP4-208ENST00000460766 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
IMP4-208ENST00000460766 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
IMP4-208ENST00000460766 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
IMP4-208ENST00000460766 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
IMP4-208ENST00000460766 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
IMP4-208ENST00000460766 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
IMP4-208ENST00000460766 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
IMP4-208ENST00000460766 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
IMP4-208ENST00000460766 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
IMP4-208ENST00000460766 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
IMP4-208ENST00000460766 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
IMP4-208ENST00000460766 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms