RNA–Protein interactions for RNA: ENST00000460500.1

SSX2IP-205, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 2,116 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-205ENST00000460500 VPS13BQ7Z7G8 4022 aa1.64□□□□□ -2.15
SSX2IP-205ENST00000460500 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
SSX2IP-205ENST00000460500 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
SSX2IP-205ENST00000460500 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
SSX2IP-205ENST00000460500 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
SSX2IP-205ENST00000460500 PCLOQ9Y6V0 5065 aa1.6□□□□□ -2.15
SSX2IP-205ENST00000460500 HYDINQ4G0P3 5121 aa1.6□□□□□ -2.15
SSX2IP-205ENST00000460500 DYNC1H1Q14204 4646 aaKnown RBP1.59□□□□□ -2.15
SSX2IP-205ENST00000460500 HSPG2P98160 4391 aa1.59□□□□□ -2.15
SSX2IP-205ENST00000460500 FAT3Q8TDW7 4589 aa1.59□□□□□ -2.16
SSX2IP-205ENST00000460500 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
SSX2IP-205ENST00000460500 RYR1P21817 5038 aa1.56□□□□□ -2.16
SSX2IP-205ENST00000460500 KIAA1109Q2LD37 5005 aa1.54□□□□□ -2.16
SSX2IP-205ENST00000460500 ABCA13Q86UQ4 5058 aa1.53□□□□□ -2.16
SSX2IP-205ENST00000460500 PRM1P04553 51 aa1.52□□□□□ -2.17
SSX2IP-205ENST00000460500 FAT1Q14517 4588 aa1.51□□□□□ -2.17
SSX2IP-205ENST00000460500 HERC1Q15751 4861 aa1.46□□□□□ -2.18
SSX2IP-205ENST00000460500 LPAP08519 4548 aa1.45□□□□□ -2.18
SSX2IP-205ENST00000460500 SMR3BP02814 79 aaPredicted RBP1.45□□□□□ -2.18
SSX2IP-205ENST00000460500 HMCN2Q8NDA2 5059 aa1.43□□□□□ -2.18
SSX2IP-205ENST00000460500 SPRR2GQ9BYE4 73 aa1.42□□□□□ -2.18
SSX2IP-205ENST00000460500 KRTAP19-2Q3LHN2 52 aa1.42□□□□□ -2.18
SSX2IP-205ENST00000460500 UBR4Q5T4S7 5183 aa1.41□□□□□ -2.18
SSX2IP-205ENST00000460500 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
SSX2IP-205ENST00000460500 MUC17Q685J3 4493 aa1.39□□□□□ -2.19
SSX2IP-205ENST00000460500 RNF213Q63HN8 5207 aa1.36□□□□□ -2.19
SSX2IP-205ENST00000460500 KRTAP19-5Q3LI72 72 aa1.36□□□□□ -2.19
SSX2IP-205ENST00000460500 MT1HL1P0DM35 61 aa1.35□□□□□ -2.19
SSX2IP-205ENST00000460500 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
SSX2IP-205ENST00000460500 LRP2P98164 4655 aa1.34□□□□□ -2.19
SSX2IP-205ENST00000460500 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
SSX2IP-205ENST00000460500 KRTAP5-7Q6L8G8 165 aa1.32□□□□□ -2.2
SSX2IP-205ENST00000460500 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
SSX2IP-205ENST00000460500 FAT4Q6V0I7 4981 aa1.31□□□□□ -2.2
SSX2IP-205ENST00000460500 MT1XP80297 61 aa1.31□□□□□ -2.2
SSX2IP-205ENST00000460500 KRTAP19-8Q3LI54 63 aa1.31□□□□□ -2.2
SSX2IP-205ENST00000460500 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.2
SSX2IP-205ENST00000460500 SYNE1Q8NF91 8797 aaKnown RBP1.27□□□□□ -2.21
SSX2IP-205ENST00000460500 MT1AP04731 61 aa1.27□□□□□ -2.21
SSX2IP-205ENST00000460500 MT1BP07438 61 aa1.24□□□□□ -2.21
SSX2IP-205ENST00000460500 MUC2Q02817 5179 aa1.23□□□□□ -2.21
SSX2IP-205ENST00000460500 SPRR2DP22532 72 aa1.22□□□□□ -2.21
SSX2IP-205ENST00000460500 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
SSX2IP-205ENST00000460500 MT1EP04732 61 aa1.19□□□□□ -2.22
SSX2IP-205ENST00000460500 SPRR2BP35325 72 aa1.19□□□□□ -2.22
SSX2IP-205ENST00000460500 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
SSX2IP-205ENST00000460500 MT1FP04733 61 aa1.18□□□□□ -2.22
SSX2IP-205ENST00000460500 MT2AP02795 61 aa1.17□□□□□ -2.22
SSX2IP-205ENST00000460500 MT1LQ93083 61 aa1.17□□□□□ -2.22
SSX2IP-205ENST00000460500 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
SSX2IP-205ENST00000460500 FSIP2Q5CZC0 6907 aa1.16□□□□□ -2.22
SSX2IP-205ENST00000460500 MT1HP80294 61 aa1.16□□□□□ -2.22
SSX2IP-205ENST00000460500 SPRR2AP35326 72 aa1.14□□□□□ -2.23
SSX2IP-205ENST00000460500 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SSX2IP-205ENST00000460500 NEBP20929 6669 aa1.12□□□□□ -2.23
SSX2IP-205ENST00000460500 SSPOA2VEC9 5147 aa1.12□□□□□ -2.23
SSX2IP-205ENST00000460500 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
SSX2IP-205ENST00000460500 SPRR2FQ96RM1 72 aa1.1□□□□□ -2.23
SSX2IP-205ENST00000460500 MACF1Q9UPN3 7388 aaKnown RBP1.1□□□□□ -2.23
SSX2IP-205ENST00000460500 USH2AO75445 5202 aa1.09□□□□□ -2.23
SSX2IP-205ENST00000460500 SYNE2Q8WXH0 6885 aaKnown RBP1.09□□□□□ -2.23
SSX2IP-205ENST00000460500 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.24
SSX2IP-205ENST00000460500 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
SSX2IP-205ENST00000460500 KRTAP19-6Q3LI70 58 aa1.07□□□□□ -2.24
SSX2IP-205ENST00000460500 MT1GP13640 62 aa1.06□□□□□ -2.24
SSX2IP-205ENST00000460500 SPRR2EP22531 72 aa1.06□□□□□ -2.24
SSX2IP-205ENST00000460500 MT1MQ8N339 61 aa1.01□□□□□ -2.25
SSX2IP-205ENST00000460500 MUC12Q9UKN1 5478 aa0.99□□□□□ -2.25
SSX2IP-205ENST00000460500 KRTAP6-1Q3LI64 71 aa0.97□□□□□ -2.25
SSX2IP-205ENST00000460500 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
SSX2IP-205ENST00000460500 KMT2DO14686 5537 aa0.93□□□□□ -2.26
SSX2IP-205ENST00000460500 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
SSX2IP-205ENST00000460500 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
SSX2IP-205ENST00000460500 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
SSX2IP-205ENST00000460500 MT4P47944 62 aa0.79□□□□□ -2.28
SSX2IP-205ENST00000460500 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
SSX2IP-205ENST00000460500 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
SSX2IP-205ENST00000460500 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 96.9 ms