RNA–Protein interactions for RNA: ENST00000458477.6

PXN-206, Transcript of paxillin, humanhuman

TSL 1 (best) BASIC

Gene PXN, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-206ENST00000458477 MT1GP13640 62 aa3.56□□□□□ -1.84
PXN-206ENST00000458477 KRTAP19-4Q3LI73 84 aa3.54□□□□□ -1.84
PXN-206ENST00000458477 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
PXN-206ENST00000458477 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
PXN-206ENST00000458477 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
PXN-206ENST00000458477 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
PXN-206ENST00000458477 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
PXN-206ENST00000458477 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
PXN-206ENST00000458477 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.85
PXN-206ENST00000458477 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
PXN-206ENST00000458477 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
PXN-206ENST00000458477 SPRR2EP22531 72 aa3.42□□□□□ -1.86
PXN-206ENST00000458477 SPRR2BP35325 72 aa3.42□□□□□ -1.86
PXN-206ENST00000458477 SPRR2AP35326 72 aa3.42□□□□□ -1.86
PXN-206ENST00000458477 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
PXN-206ENST00000458477 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
PXN-206ENST00000458477 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
PXN-206ENST00000458477 MT1MQ8N339 61 aa3.37□□□□□ -1.87
PXN-206ENST00000458477 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
PXN-206ENST00000458477 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
PXN-206ENST00000458477 SPRR2DP22532 72 aa3.29□□□□□ -1.88
PXN-206ENST00000458477 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
PXN-206ENST00000458477 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
PXN-206ENST00000458477 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
PXN-206ENST00000458477 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
PXN-206ENST00000458477 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
PXN-206ENST00000458477 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
PXN-206ENST00000458477 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
PXN-206ENST00000458477 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
PXN-206ENST00000458477 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
PXN-206ENST00000458477 LCE5AQ5TCM9 118 aa3.11□□□□□ -1.91
PXN-206ENST00000458477 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
PXN-206ENST00000458477 PRM1P04553 51 aa3.06□□□□□ -1.92
PXN-206ENST00000458477 MT1AP04731 61 aa3.04□□□□□ -1.92
PXN-206ENST00000458477 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
PXN-206ENST00000458477 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
PXN-206ENST00000458477 MT4P47944 62 aa2.94□□□□□ -1.94
PXN-206ENST00000458477 MT3P25713 68 aa2.86□□□□□ -1.95
PXN-206ENST00000458477 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
PXN-206ENST00000458477 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
PXN-206ENST00000458477 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
PXN-206ENST00000458477 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
PXN-206ENST00000458477 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
PXN-206ENST00000458477 NEBP20929 6669 aa2.74□□□□□ -1.97
PXN-206ENST00000458477 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
PXN-206ENST00000458477 LCE4AQ5TA78 99 aa2.71□□□□□ -1.98
PXN-206ENST00000458477 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
PXN-206ENST00000458477 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
PXN-206ENST00000458477 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
PXN-206ENST00000458477 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
PXN-206ENST00000458477 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
PXN-206ENST00000458477 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
PXN-206ENST00000458477 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
PXN-206ENST00000458477 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
PXN-206ENST00000458477 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
PXN-206ENST00000458477 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
PXN-206ENST00000458477 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
PXN-206ENST00000458477 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
PXN-206ENST00000458477 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
PXN-206ENST00000458477 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
PXN-206ENST00000458477 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
PXN-206ENST00000458477 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
PXN-206ENST00000458477 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
PXN-206ENST00000458477 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
PXN-206ENST00000458477 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
PXN-206ENST00000458477 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
PXN-206ENST00000458477 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
PXN-206ENST00000458477 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
PXN-206ENST00000458477 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
PXN-206ENST00000458477 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
PXN-206ENST00000458477 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
PXN-206ENST00000458477 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
PXN-206ENST00000458477 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
PXN-206ENST00000458477 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
PXN-206ENST00000458477 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
PXN-206ENST00000458477 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
PXN-206ENST00000458477 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 69.5 ms